Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 GPAA1P2-202ENST00000606848 1787 ntBASIC15.11■□□□□ 0.01
CD47Q08722 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CD47Q08722 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.11■□□□□ 0.01
CD47Q08722 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CD47Q08722 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.11■□□□□ 0.01
CD47Q08722 AC092919.2-201ENST00000623631 1645 ntBASIC15.11■□□□□ 0.01
CD47Q08722 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CD47Q08722 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.11■□□□□ 0.01
CD47Q08722 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.11■□□□□ 0.01
CD47Q08722 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.11■□□□□ 0.01
CD47Q08722 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.11■□□□□ 0.01
CD47Q08722 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.11■□□□□ 0.01
CD47Q08722 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.11■□□□□ 0.01
CD47Q08722 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.11■□□□□ 0.01
CD47Q08722 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.11■□□□□ 0.01
CD47Q08722 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CD47Q08722 AC073648.2-201ENST00000510116 352 ntBASIC15.11■□□□□ 0.01
CD47Q08722 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CD47Q08722 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.11■□□□□ 0.01
CD47Q08722 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.11■□□□□ 0.01
CD47Q08722 AC021087.4-201ENST00000563761 564 ntBASIC15.11■□□□□ 0.01
CD47Q08722 AC010654.1-201ENST00000615722 808 ntBASIC15.11■□□□□ 0.01
CD47Q08722 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.11■□□□□ 0.01
CD47Q08722 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.11■□□□□ 0.01
CD47Q08722 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.11■□□□□ 0.01
CD47Q08722 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.11■□□□□ 0.01
CD47Q08722 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
CD47Q08722 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CD47Q08722 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CD47Q08722 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CD47Q08722 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CD47Q08722 AC068587.6-202ENST00000641839 5619 ntBASIC15.11■□□□□ 0.01
CD47Q08722 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CD47Q08722 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD47Q08722 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
CD47Q08722 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.1■□□□□ 0.01
CD47Q08722 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.1■□□□□ 0.01
CD47Q08722 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.1■□□□□ 0.01
CD47Q08722 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.1■□□□□ 0.01
CD47Q08722 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 LAGE3P1-201ENST00000425356 484 ntBASIC15.1■□□□□ 0.01
CD47Q08722 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.1■□□□□ 0.01
CD47Q08722 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.1■□□□□ 0.01
CD47Q08722 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.1■□□□□ 0.01
CD47Q08722 AC006557.2-201ENST00000592985 1240 ntBASIC15.1■□□□□ 0.01
CD47Q08722 AC025062.2-201ENST00000605477 670 ntBASIC15.1■□□□□ 0.01
CD47Q08722 AC004706.3-202ENST00000621574 984 ntBASIC15.1■□□□□ 0.01
CD47Q08722 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.1■□□□□ 0.01
CD47Q08722 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.1■□□□□ 0.01
CD47Q08722 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.1■□□□□ 0.01
CD47Q08722 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.1■□□□□ 0.01
CD47Q08722 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.1■□□□□ 0.01
CD47Q08722 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CD47Q08722 AC026748.1-201ENST00000624349 3251 ntBASIC15.1■□□□□ 0.01
CD47Q08722 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD47Q08722 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.1■□□□□ 0.01
CD47Q08722 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CD47Q08722 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
CD47Q08722 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms