Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 AL353705.2-201ENST00000428243 662 ntBASIC14.28□□□□□ -0.12
UBE2NP61088 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.28□□□□□ -0.12
UBE2NP61088 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
UBE2NP61088 AC067863.1-201ENST00000494933 530 ntBASIC14.28□□□□□ -0.12
UBE2NP61088 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.28□□□□□ -0.12
UBE2NP61088 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2NP61088 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.28□□□□□ -0.12
UBE2NP61088 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2NP61088 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2NP61088 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.28□□□□□ -0.12
UBE2NP61088 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.28□□□□□ -0.12
UBE2NP61088 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
UBE2NP61088 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.28□□□□□ -0.12
UBE2NP61088 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2NP61088 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2NP61088 AP3S2-216ENST00000617003 1561 ntBASIC14.28□□□□□ -0.12
UBE2NP61088 AC093028.1-201ENST00000622998 982 ntBASIC14.28□□□□□ -0.12
UBE2NP61088 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
UBE2NP61088 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.28□□□□□ -0.12
UBE2NP61088 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.28□□□□□ -0.12
UBE2NP61088 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
UBE2NP61088 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2NP61088 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
UBE2NP61088 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2NP61088 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2NP61088 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2NP61088 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
UBE2NP61088 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.27□□□□□ -0.12
UBE2NP61088 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.27□□□□□ -0.12
UBE2NP61088 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
UBE2NP61088 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
UBE2NP61088 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.27□□□□□ -0.12
UBE2NP61088 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2NP61088 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2NP61088 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.27□□□□□ -0.12
UBE2NP61088 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2NP61088 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2NP61088 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2NP61088 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2NP61088 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
UBE2NP61088 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.27□□□□□ -0.12
UBE2NP61088 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2NP61088 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2NP61088 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2NP61088 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.27□□□□□ -0.12
UBE2NP61088 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
UBE2NP61088 AL139400.1-201ENST00000366220 510 ntBASIC14.27□□□□□ -0.13
UBE2NP61088 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2NP61088 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2NP61088 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.27□□□□□ -0.13
UBE2NP61088 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.27□□□□□ -0.13
UBE2NP61088 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.27□□□□□ -0.13
UBE2NP61088 GPS2P2-201ENST00000430745 888 ntBASIC14.27□□□□□ -0.13
UBE2NP61088 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2NP61088 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.27□□□□□ -0.13
UBE2NP61088 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.27□□□□□ -0.13
UBE2NP61088 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
UBE2NP61088 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.27□□□□□ -0.13
UBE2NP61088 AC109322.1-201ENST00000524499 1264 ntBASIC14.27□□□□□ -0.13
UBE2NP61088 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.27□□□□□ -0.13
UBE2NP61088 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.27□□□□□ -0.13
UBE2NP61088 AC003101.2-201ENST00000612557 442 ntBASIC14.27□□□□□ -0.13
UBE2NP61088 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
UBE2NP61088 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2NP61088 AC005052.1-201ENST00000625181 2492 ntBASIC14.27□□□□□ -0.13
UBE2NP61088 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2NP61088 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.27□□□□□ -0.13
UBE2NP61088 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.27□□□□□ -0.13
UBE2NP61088 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.27□□□□□ -0.13
UBE2NP61088 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
UBE2NP61088 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2NP61088 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2NP61088 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2NP61088 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2NP61088 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2NP61088 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.27□□□□□ -0.13
UBE2NP61088 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.27□□□□□ -0.13
UBE2NP61088 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.27□□□□□ -0.13
UBE2NP61088 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2NP61088 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
UBE2NP61088 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.27□□□□□ -0.13
UBE2NP61088 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2NP61088 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2NP61088 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.26□□□□□ -0.13
UBE2NP61088 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2NP61088 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
UBE2NP61088 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2NP61088 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2NP61088 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2NP61088 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2NP61088 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UBE2NP61088 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UBE2NP61088 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UBE2NP61088 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2NP61088 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.26□□□□□ -0.13
UBE2NP61088 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2NP61088 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2NP61088 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UBE2NP61088 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2NP61088 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms