Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
FOXG1P55316 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
FOXG1P55316 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXG1P55316 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXG1P55316 AL080243.2-201ENST00000418783 582 ntBASIC14.17□□□□□ -0.14
FOXG1P55316 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
FOXG1P55316 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXG1P55316 AL139010.1-201ENST00000454878 894 ntBASIC14.17□□□□□ -0.14
FOXG1P55316 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXG1P55316 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXG1P55316 TEX28P1-201ENST00000613479 1221 ntBASIC14.17□□□□□ -0.14
FOXG1P55316 TEX28P2-201ENST00000617764 1221 ntBASIC14.17□□□□□ -0.14
FOXG1P55316 AL590560.3-201ENST00000623350 461 ntBASIC14.17□□□□□ -0.14
FOXG1P55316 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXG1P55316 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXG1P55316 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXG1P55316 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXG1P55316 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
FOXG1P55316 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXG1P55316 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXG1P55316 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
FOXG1P55316 CYP2T1P-202ENST00000641596 2535 ntBASIC14.16□□□□□ -0.14
FOXG1P55316 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXG1P55316 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.16□□□□□ -0.14
FOXG1P55316 AC100757.3-201ENST00000622361 1406 ntBASIC14.16□□□□□ -0.14
FOXG1P55316 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXG1P55316 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
FOXG1P55316 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.16□□□□□ -0.14
FOXG1P55316 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
FOXG1P55316 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
FOXG1P55316 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
FOXG1P55316 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 TSSK5P-201ENST00000423978 907 ntBASIC14.16□□□□□ -0.14
FOXG1P55316 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.16□□□□□ -0.14
FOXG1P55316 UGT1A2P-201ENST00000454886 866 ntBASIC14.16□□□□□ -0.14
FOXG1P55316 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXG1P55316 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.16□□□□□ -0.14
FOXG1P55316 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.16□□□□□ -0.14
FOXG1P55316 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.16□□□□□ -0.14
FOXG1P55316 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.16□□□□□ -0.14
FOXG1P55316 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.16□□□□□ -0.14
FOXG1P55316 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.16□□□□□ -0.14
FOXG1P55316 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXG1P55316 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.16□□□□□ -0.14
FOXG1P55316 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
FOXG1P55316 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.16□□□□□ -0.14
FOXG1P55316 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
FOXG1P55316 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
FOXG1P55316 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXG1P55316 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXG1P55316 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
FOXG1P55316 AP003680.1-201ENST00000598970 3660 ntBASIC14.16□□□□□ -0.14
FOXG1P55316 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FOXG1P55316 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXG1P55316 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXG1P55316 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXG1P55316 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
FOXG1P55316 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXG1P55316 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms