Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH6P55285 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH6P55285 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH6P55285 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDH6P55285 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDH6P55285 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH6P55285 AP003680.1-201ENST00000598970 3660 ntBASIC16.88■□□□□ 0.29
CDH6P55285 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH6P55285 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CDH6P55285 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH6P55285 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDH6P55285 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDH6P55285 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH6P55285 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH6P55285 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDH6P55285 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH6P55285 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH6P55285 AC008677.1-201ENST00000519230 1561 ntBASIC16.87■□□□□ 0.29
CDH6P55285 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH6P55285 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
CDH6P55285 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH6P55285 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH6P55285 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CDH6P55285 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH6P55285 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH6P55285 ADH5P3-201ENST00000433842 1137 ntBASIC16.87■□□□□ 0.29
CDH6P55285 DNAJB3-201ENST00000446806 729 ntBASIC16.87■□□□□ 0.29
CDH6P55285 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH6P55285 AC105233.2-201ENST00000523697 349 ntBASIC16.87■□□□□ 0.29
CDH6P55285 AF228730.5-201ENST00000530288 346 ntBASIC16.87■□□□□ 0.29
CDH6P55285 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.87■□□□□ 0.29
CDH6P55285 AC027307.2-201ENST00000591252 911 ntBASIC16.87■□□□□ 0.29
CDH6P55285 MIR4321-201ENST00000592276 80 ntBASIC16.87■□□□□ 0.29
CDH6P55285 C20orf181-201ENST00000623918 480 ntBASIC16.87■□□□□ 0.29
CDH6P55285 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.87■□□□□ 0.29
CDH6P55285 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH6P55285 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDH6P55285 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH6P55285 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CDH6P55285 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH6P55285 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH6P55285 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH6P55285 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH6P55285 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDH6P55285 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CDH6P55285 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CDH6P55285 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH6P55285 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH6P55285 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDH6P55285 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDH6P55285 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH6P55285 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH6P55285 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH6P55285 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.86■□□□□ 0.29
CDH6P55285 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
CDH6P55285 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH6P55285 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDH6P55285 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDH6P55285 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH6P55285 MKNK2P1-201ENST00000437526 628 ntBASIC16.86■□□□□ 0.29
CDH6P55285 ACTG1P14-201ENST00000446382 1122 ntBASIC16.86■□□□□ 0.29
CDH6P55285 AC245100.5-201ENST00000452108 331 ntBASIC16.86■□□□□ 0.29
CDH6P55285 RN7SL589P-201ENST00000481268 310 ntBASIC16.86■□□□□ 0.29
CDH6P55285 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH6P55285 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH6P55285 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH6P55285 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH6P55285 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH6P55285 AC008267.7-201ENST00000624570 1194 ntBASIC16.86■□□□□ 0.29
CDH6P55285 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDH6P55285 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH6P55285 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH6P55285 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH6P55285 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH6P55285 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDH6P55285 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH6P55285 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.86■□□□□ 0.29
CDH6P55285 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CDH6P55285 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH6P55285 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH6P55285 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms