Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 PCDH8P1-201ENST00000428983 2773 ntBASIC15.14■□□□□ 0.01
PSMD4P55036 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
PSMD4P55036 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 MIR648-201ENST00000385046 94 ntBASIC15.14■□□□□ 0.01
PSMD4P55036 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.14■□□□□ 0.01
PSMD4P55036 CEND1P1-201ENST00000451006 455 ntBASIC15.14■□□□□ 0.01
PSMD4P55036 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.14■□□□□ 0.01
PSMD4P55036 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.14■□□□□ 0.01
PSMD4P55036 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.14■□□□□ 0.01
PSMD4P55036 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.14■□□□□ 0.01
PSMD4P55036 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.14■□□□□ 0.01
PSMD4P55036 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.14■□□□□ 0.01
PSMD4P55036 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.14■□□□□ 0.01
PSMD4P55036 AL365330.1-201ENST00000607459 531 ntBASIC15.14■□□□□ 0.01
PSMD4P55036 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PSMD4P55036 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.14■□□□□ 0.01
PSMD4P55036 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.14■□□□□ 0.01
PSMD4P55036 AC068418.2-201ENST00000577309 3703 ntBASIC15.14■□□□□ 0.01
PSMD4P55036 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.14■□□□□ 0.01
PSMD4P55036 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.14■□□□□ 0.01
PSMD4P55036 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.14■□□□□ 0.01
PSMD4P55036 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PSMD4P55036 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PSMD4P55036 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.14■□□□□ 0.01
PSMD4P55036 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PSMD4P55036 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.13■□□□□ 0.01
PSMD4P55036 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PSMD4P55036 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.13■□□□□ 0.01
PSMD4P55036 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PSMD4P55036 AC079328.2-201ENST00000561241 3354 ntBASIC15.13■□□□□ 0.01
PSMD4P55036 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PSMD4P55036 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PSMD4P55036 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.13■□□□□ 0.01
PSMD4P55036 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
PSMD4P55036 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.13■□□□□ 0.01
PSMD4P55036 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PSMD4P55036 CICP6-201ENST00000457191 2729 ntBASIC15.13■□□□□ 0.01
PSMD4P55036 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PSMD4P55036 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PSMD4P55036 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PSMD4P55036 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PSMD4P55036 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.13■□□□□ 0.01
PSMD4P55036 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PSMD4P55036 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PSMD4P55036 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.13■□□□□ 0.01
PSMD4P55036 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.13■□□□□ 0.01
PSMD4P55036 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PSMD4P55036 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.13■□□□□ 0.01
PSMD4P55036 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.13■□□□□ 0.01
PSMD4P55036 AC092865.5-201ENST00000545435 363 ntBASIC15.13■□□□□ 0.01
PSMD4P55036 KRT8P23-201ENST00000560090 1207 ntBASIC15.13■□□□□ 0.01
PSMD4P55036 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.13■□□□□ 0.01
PSMD4P55036 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.13■□□□□ 0.01
PSMD4P55036 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.13■□□□□ 0.01
PSMD4P55036 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PSMD4P55036 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PSMD4P55036 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PSMD4P55036 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PSMD4P55036 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
PSMD4P55036 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PSMD4P55036 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
PSMD4P55036 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.13■□□□□ 0.01
PSMD4P55036 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PSMD4P55036 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.12■□□□□ 0.01
PSMD4P55036 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
PSMD4P55036 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.12■□□□□ 0.01
PSMD4P55036 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.12■□□□□ 0.01
PSMD4P55036 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.12■□□□□ 0.01
PSMD4P55036 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.12■□□□□ 0.01
PSMD4P55036 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.12■□□□□ 0.01
PSMD4P55036 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PSMD4P55036 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms