Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC17.91■□□□□ 0.46
LBX1P52954 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LBX1P52954 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.91■□□□□ 0.46
LBX1P52954 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC17.91■□□□□ 0.46
LBX1P52954 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LBX1P52954 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.91■□□□□ 0.46
LBX1P52954 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LBX1P52954 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.91■□□□□ 0.46
LBX1P52954 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC17.91■□□□□ 0.46
LBX1P52954 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LBX1P52954 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LBX1P52954 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LBX1P52954 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LBX1P52954 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LBX1P52954 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LBX1P52954 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LBX1P52954 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LBX1P52954 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LBX1P52954 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LBX1P52954 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LBX1P52954 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LBX1P52954 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.9■□□□□ 0.46
LBX1P52954 AC016396.2-201ENST00000562575 1417 ntBASIC17.9■□□□□ 0.46
LBX1P52954 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LBX1P52954 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LBX1P52954 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.9■□□□□ 0.46
LBX1P52954 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.9■□□□□ 0.46
LBX1P52954 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LBX1P52954 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LBX1P52954 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.9■□□□□ 0.46
LBX1P52954 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC17.9■□□□□ 0.46
LBX1P52954 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.9■□□□□ 0.46
LBX1P52954 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.9■□□□□ 0.46
LBX1P52954 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
LBX1P52954 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.9■□□□□ 0.46
LBX1P52954 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.9■□□□□ 0.46
LBX1P52954 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.9■□□□□ 0.46
LBX1P52954 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.9■□□□□ 0.46
LBX1P52954 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LBX1P52954 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.9■□□□□ 0.46
LBX1P52954 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.9■□□□□ 0.46
LBX1P52954 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.9■□□□□ 0.46
LBX1P52954 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.9■□□□□ 0.46
LBX1P52954 AC103810.10-201ENST00000606504 343 ntBASIC17.9■□□□□ 0.46
LBX1P52954 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LBX1P52954 AL023803.2-201ENST00000620080 638 ntBASIC17.9■□□□□ 0.46
LBX1P52954 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LBX1P52954 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LBX1P52954 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.9■□□□□ 0.46
LBX1P52954 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
LBX1P52954 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LBX1P52954 KRT8P29-201ENST00000420409 1371 ntBASIC17.9■□□□□ 0.46
LBX1P52954 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.9■□□□□ 0.46
LBX1P52954 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LBX1P52954 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
LBX1P52954 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LBX1P52954 GPAA1P2-202ENST00000606848 1787 ntBASIC17.89■□□□□ 0.45
LBX1P52954 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LBX1P52954 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LBX1P52954 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
LBX1P52954 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.89■□□□□ 0.45
LBX1P52954 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.89■□□□□ 0.45
LBX1P52954 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LBX1P52954 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LBX1P52954 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LBX1P52954 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.89■□□□□ 0.45
LBX1P52954 AL627231.1-201ENST00000394467 1125 ntBASIC17.89■□□□□ 0.45
LBX1P52954 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LBX1P52954 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.89■□□□□ 0.45
LBX1P52954 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.89■□□□□ 0.45
LBX1P52954 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.89■□□□□ 0.45
LBX1P52954 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LBX1P52954 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
LBX1P52954 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
LBX1P52954 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.89■□□□□ 0.45
LBX1P52954 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.89■□□□□ 0.45
LBX1P52954 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.89■□□□□ 0.45
LBX1P52954 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC17.89■□□□□ 0.45
LBX1P52954 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LBX1P52954 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LBX1P52954 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LBX1P52954 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
LBX1P52954 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LBX1P52954 AC074138.1-201ENST00000611182 1303 ntBASIC17.89■□□□□ 0.45
LBX1P52954 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LBX1P52954 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LBX1P52954 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.89■□□□□ 0.45
LBX1P52954 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LBX1P52954 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.89■□□□□ 0.45
LBX1P52954 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LBX1P52954 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LBX1P52954 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LBX1P52954 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LBX1P52954 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LBX1P52954 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.88■□□□□ 0.45
LBX1P52954 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.88■□□□□ 0.45
LBX1P52954 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.88■□□□□ 0.45
LBX1P52954 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.88■□□□□ 0.45
LBX1P52954 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LBX1P52954 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms