Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
PDX1P52945 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDX1P52945 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDX1P52945 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDX1P52945 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDX1P52945 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.72■□□□□ 0.11
PDX1P52945 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDX1P52945 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDX1P52945 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDX1P52945 HLA-A-202ENST00000376806 1854 ntBASIC15.72■□□□□ 0.11
PDX1P52945 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDX1P52945 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PDX1P52945 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDX1P52945 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PDX1P52945 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDX1P52945 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.72■□□□□ 0.11
PDX1P52945 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDX1P52945 GNAQP1-201ENST00000444815 1067 ntBASIC15.72■□□□□ 0.11
PDX1P52945 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDX1P52945 AC135586.1-201ENST00000539323 574 ntBASIC15.72■□□□□ 0.11
PDX1P52945 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PDX1P52945 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.72■□□□□ 0.11
PDX1P52945 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.72■□□□□ 0.11
PDX1P52945 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDX1P52945 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDX1P52945 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
PDX1P52945 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDX1P52945 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PDX1P52945 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDX1P52945 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDX1P52945 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.72■□□□□ 0.11
PDX1P52945 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDX1P52945 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.72■□□□□ 0.11
PDX1P52945 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PDX1P52945 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDX1P52945 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDX1P52945 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
PDX1P52945 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDX1P52945 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PDX1P52945 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDX1P52945 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.71■□□□□ 0.11
PDX1P52945 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.71■□□□□ 0.11
PDX1P52945 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.71■□□□□ 0.11
PDX1P52945 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDX1P52945 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.71■□□□□ 0.11
PDX1P52945 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.71■□□□□ 0.11
PDX1P52945 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDX1P52945 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDX1P52945 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDX1P52945 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.71■□□□□ 0.11
PDX1P52945 KRT17P7-201ENST00000451704 1104 ntBASIC15.71■□□□□ 0.11
PDX1P52945 SPDYE18-201ENST00000510091 1050 ntBASIC15.71■□□□□ 0.11
PDX1P52945 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.71■□□□□ 0.11
PDX1P52945 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDX1P52945 AL512361.1-201ENST00000554200 418 ntBASIC15.71■□□□□ 0.11
PDX1P52945 AC010336.2-201ENST00000564226 506 ntBASIC15.71■□□□□ 0.11
PDX1P52945 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDX1P52945 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
PDX1P52945 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDX1P52945 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDX1P52945 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.71■□□□□ 0.11
PDX1P52945 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDX1P52945 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PDX1P52945 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.71■□□□□ 0.1
PDX1P52945 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.71■□□□□ 0.1
PDX1P52945 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.71■□□□□ 0.1
PDX1P52945 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
PDX1P52945 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PDX1P52945 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PDX1P52945 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.7■□□□□ 0.1
PDX1P52945 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDX1P52945 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PDX1P52945 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.7■□□□□ 0.1
PDX1P52945 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDX1P52945 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.7■□□□□ 0.1
PDX1P52945 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDX1P52945 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDX1P52945 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PDX1P52945 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PDX1P52945 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDX1P52945 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
PDX1P52945 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDX1P52945 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDX1P52945 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDX1P52945 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PDX1P52945 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
PDX1P52945 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDX1P52945 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDX1P52945 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PDX1P52945 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.7■□□□□ 0.1
PDX1P52945 ARSEP1-201ENST00000420443 635 ntBASIC15.7■□□□□ 0.1
PDX1P52945 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.7■□□□□ 0.1
PDX1P52945 AL353779.1-201ENST00000434793 351 ntBASIC15.7■□□□□ 0.1
PDX1P52945 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.7■□□□□ 0.1
PDX1P52945 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PDX1P52945 AL359881.2-201ENST00000602973 570 ntBASIC15.7■□□□□ 0.1
PDX1P52945 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDX1P52945 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PDX1P52945 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.7■□□□□ 0.1
PDX1P52945 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms