Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HCFC1P51610 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCFC1P51610 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HCFC1P51610 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
HCFC1P51610 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.02□□□□□ -0.17
HCFC1P51610 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCFC1P51610 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.02□□□□□ -0.17
HCFC1P51610 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
HCFC1P51610 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.02□□□□□ -0.17
HCFC1P51610 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCFC1P51610 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HCFC1P51610 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.02□□□□□ -0.17
HCFC1P51610 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.02□□□□□ -0.17
HCFC1P51610 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.02□□□□□ -0.17
HCFC1P51610 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.02□□□□□ -0.17
HCFC1P51610 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.02□□□□□ -0.17
HCFC1P51610 AL158212.4-201ENST00000624062 1286 ntBASIC14.02□□□□□ -0.17
HCFC1P51610 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.02□□□□□ -0.17
HCFC1P51610 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.01□□□□□ -0.17
HCFC1P51610 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HCFC1P51610 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
HCFC1P51610 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
HCFC1P51610 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.01□□□□□ -0.17
HCFC1P51610 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HCFC1P51610 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.01□□□□□ -0.17
HCFC1P51610 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.01□□□□□ -0.17
HCFC1P51610 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.01□□□□□ -0.17
HCFC1P51610 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HCFC1P51610 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.01□□□□□ -0.17
HCFC1P51610 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.01□□□□□ -0.17
HCFC1P51610 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.01□□□□□ -0.17
HCFC1P51610 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
HCFC1P51610 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HCFC1P51610 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.01□□□□□ -0.17
HCFC1P51610 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.01□□□□□ -0.17
HCFC1P51610 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HCFC1P51610 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.01□□□□□ -0.17
HCFC1P51610 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.01□□□□□ -0.17
HCFC1P51610 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HCFC1P51610 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HCFC1P51610 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14□□□□□ -0.17
HCFC1P51610 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14□□□□□ -0.17
HCFC1P51610 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14□□□□□ -0.17
HCFC1P51610 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HCFC1P51610 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14□□□□□ -0.17
HCFC1P51610 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14□□□□□ -0.17
HCFC1P51610 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HCFC1P51610 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14□□□□□ -0.17
HCFC1P51610 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HCFC1P51610 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HCFC1P51610 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HCFC1P51610 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HCFC1P51610 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HCFC1P51610 TOMM22P5-201ENST00000416399 439 ntBASIC14□□□□□ -0.17
HCFC1P51610 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14□□□□□ -0.17
HCFC1P51610 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14□□□□□ -0.17
HCFC1P51610 AL442647.2-201ENST00000429864 857 ntBASIC14□□□□□ -0.17
HCFC1P51610 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14□□□□□ -0.17
HCFC1P51610 FTH1P14-201ENST00000482930 551 ntBASIC14□□□□□ -0.17
HCFC1P51610 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14□□□□□ -0.17
HCFC1P51610 AC104596.2-201ENST00000512793 793 ntBASIC14□□□□□ -0.17
HCFC1P51610 MFF-223ENST00000524634 647 ntTSL 2 BASIC14□□□□□ -0.17
HCFC1P51610 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14□□□□□ -0.17
HCFC1P51610 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14□□□□□ -0.17
HCFC1P51610 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
HCFC1P51610 AC105020.1-201ENST00000435356 2205 ntBASIC14□□□□□ -0.17
HCFC1P51610 PCDHA14-201ENST00000506751 2298 ntBASIC14□□□□□ -0.17
HCFC1P51610 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HCFC1P51610 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HCFC1P51610 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HCFC1P51610 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HCFC1P51610 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14□□□□□ -0.17
HCFC1P51610 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HCFC1P51610 AC018695.7-201ENST00000624587 2492 ntBASIC14□□□□□ -0.17
HCFC1P51610 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HCFC1P51610 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14□□□□□ -0.17
HCFC1P51610 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms