Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.8■□□□□ 0.44
CPT1AP50416 RPSAP52-203ENST00000622976 1023 ntBASIC17.8■□□□□ 0.44
CPT1AP50416 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.8■□□□□ 0.44
CPT1AP50416 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CPT1AP50416 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPT1AP50416 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPT1AP50416 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPT1AP50416 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
CPT1AP50416 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPT1AP50416 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPT1AP50416 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.8■□□□□ 0.44
CPT1AP50416 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPT1AP50416 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CPT1AP50416 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.79■□□□□ 0.44
CPT1AP50416 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CPT1AP50416 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CPT1AP50416 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CPT1AP50416 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.79■□□□□ 0.44
CPT1AP50416 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CPT1AP50416 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
CPT1AP50416 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CPT1AP50416 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.79■□□□□ 0.44
CPT1AP50416 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.79■□□□□ 0.44
CPT1AP50416 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 AC074338.1-201ENST00000416825 156 ntBASIC17.79■□□□□ 0.44
CPT1AP50416 ACTG1P3-201ENST00000431775 1114 ntBASIC17.79■□□□□ 0.44
CPT1AP50416 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.79■□□□□ 0.44
CPT1AP50416 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.79■□□□□ 0.44
CPT1AP50416 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.79■□□□□ 0.44
CPT1AP50416 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.79■□□□□ 0.44
CPT1AP50416 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.79■□□□□ 0.44
CPT1AP50416 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.79■□□□□ 0.44
CPT1AP50416 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.79■□□□□ 0.44
CPT1AP50416 BRI3BPP1-201ENST00000594224 787 ntBASIC17.79■□□□□ 0.44
CPT1AP50416 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CPT1AP50416 AL033527.4-201ENST00000641026 673 ntBASIC17.79■□□□□ 0.44
CPT1AP50416 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.79■□□□□ 0.44
CPT1AP50416 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.79■□□□□ 0.44
CPT1AP50416 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CPT1AP50416 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPT1AP50416 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.79■□□□□ 0.44
CPT1AP50416 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.78■□□□□ 0.44
CPT1AP50416 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPT1AP50416 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPT1AP50416 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.78■□□□□ 0.44
CPT1AP50416 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPT1AP50416 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
CPT1AP50416 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CPT1AP50416 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.78■□□□□ 0.44
CPT1AP50416 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
CPT1AP50416 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPT1AP50416 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.78■□□□□ 0.44
CPT1AP50416 TOMM22P5-201ENST00000416399 439 ntBASIC17.78■□□□□ 0.44
CPT1AP50416 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.78■□□□□ 0.44
CPT1AP50416 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.78■□□□□ 0.44
CPT1AP50416 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.78■□□□□ 0.44
CPT1AP50416 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPT1AP50416 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CPT1AP50416 RPL13AP25-201ENST00000484130 612 ntBASIC17.78■□□□□ 0.44
CPT1AP50416 AC092658.1-201ENST00000505836 891 ntBASIC17.78■□□□□ 0.44
CPT1AP50416 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CPT1AP50416 SLC25A47P1-201ENST00000531577 414 ntBASIC17.78■□□□□ 0.44
CPT1AP50416 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.78■□□□□ 0.44
CPT1AP50416 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPT1AP50416 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPT1AP50416 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPT1AP50416 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPT1AP50416 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPT1AP50416 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CPT1AP50416 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPT1AP50416 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.78■□□□□ 0.44
CPT1AP50416 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms