Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
GABRA3P34903 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
GABRA3P34903 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA3P34903 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
GABRA3P34903 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.1■□□□□ 0.01
GABRA3P34903 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA3P34903 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA3P34903 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA3P34903 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA3P34903 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA3P34903 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA3P34903 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA3P34903 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.09■□□□□ 0.01
GABRA3P34903 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GABRA3P34903 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GABRA3P34903 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.09■□□□□ 0.01
GABRA3P34903 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GABRA3P34903 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GABRA3P34903 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
GABRA3P34903 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
GABRA3P34903 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.09■□□□□ 0.01
GABRA3P34903 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GABRA3P34903 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.09■□□□□ 0.01
GABRA3P34903 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.09■□□□□ 0.01
GABRA3P34903 GPX1P2-201ENST00000429271 606 ntBASIC15.09■□□□□ 0.01
GABRA3P34903 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.09■□□□□ 0.01
GABRA3P34903 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.09■□□□□ 0.01
GABRA3P34903 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.09■□□□□ 0.01
GABRA3P34903 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.09■□□□□ 0.01
GABRA3P34903 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.09■□□□□ 0.01
GABRA3P34903 AC092865.5-201ENST00000545435 363 ntBASIC15.09■□□□□ 0.01
GABRA3P34903 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.09■□□□□ 0.01
GABRA3P34903 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.09■□□□□ 0.01
GABRA3P34903 LINC01225-203ENST00000563550 1244 ntBASIC15.09■□□□□ 0.01
GABRA3P34903 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.09■□□□□ 0.01
GABRA3P34903 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.09■□□□□ 0.01
GABRA3P34903 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.09■□□□□ 0.01
GABRA3P34903 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.09■□□□□ 0.01
GABRA3P34903 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.09■□□□□ 0.01
GABRA3P34903 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.09■□□□□ 0.01
GABRA3P34903 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.09■□□□□ 0.01
GABRA3P34903 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.09■□□□□ 0.01
GABRA3P34903 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
GABRA3P34903 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.09■□□□□ 0.01
GABRA3P34903 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GABRA3P34903 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.09■□□□□ 0.01
GABRA3P34903 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GABRA3P34903 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA3P34903 AL365203.3-201ENST00000609742 2057 ntBASIC15.08■□□□□ 0.01
GABRA3P34903 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GABRA3P34903 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
GABRA3P34903 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
GABRA3P34903 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GABRA3P34903 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.08■□□□□ 0.01
GABRA3P34903 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
GABRA3P34903 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GABRA3P34903 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.08■□□□□ 0.01
GABRA3P34903 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GABRA3P34903 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
GABRA3P34903 FOXO1B-201ENST00000504678 1527 ntBASIC15.08■□□□□ 0.01
GABRA3P34903 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
GABRA3P34903 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
GABRA3P34903 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
GABRA3P34903 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GABRA3P34903 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.08■□□□□ 0
GABRA3P34903 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
GABRA3P34903 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.08■□□□□ 0
GABRA3P34903 RPSAP43-201ENST00000402237 625 ntBASIC15.08■□□□□ 0
GABRA3P34903 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.08■□□□□ 0
GABRA3P34903 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.08■□□□□ 0
GABRA3P34903 UPF3AP3-201ENST00000420996 769 ntBASIC15.08■□□□□ 0
GABRA3P34903 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.08■□□□□ 0
GABRA3P34903 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.08■□□□□ 0
GABRA3P34903 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.08■□□□□ 0
GABRA3P34903 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms