Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MIR4649-201ENST00000582839 64 ntBASIC20.75■□□□□ 0.91
RXRBP28702 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.75■□□□□ 0.91
RXRBP28702 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC20.75■□□□□ 0.91
RXRBP28702 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC20.75■□□□□ 0.91
RXRBP28702 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
RXRBP28702 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RXRBP28702 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.75■□□□□ 0.91
RXRBP28702 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RXRBP28702 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RXRBP28702 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RXRBP28702 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RXRBP28702 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RXRBP28702 AC012317.2-201ENST00000623305 2251 ntBASIC20.75■□□□□ 0.91
RXRBP28702 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RXRBP28702 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RXRBP28702 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
RXRBP28702 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RXRBP28702 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RXRBP28702 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RXRBP28702 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RXRBP28702 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RXRBP28702 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.74■□□□□ 0.91
RXRBP28702 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RXRBP28702 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RXRBP28702 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RXRBP28702 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RXRBP28702 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RXRBP28702 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RXRBP28702 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RXRBP28702 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC20.74■□□□□ 0.91
RXRBP28702 KRT18P43-201ENST00000469825 1281 ntBASIC20.74■□□□□ 0.91
RXRBP28702 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RXRBP28702 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RXRBP28702 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RXRBP28702 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RXRBP28702 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RXRBP28702 AC124947.2-201ENST00000547118 1133 ntBASIC20.74■□□□□ 0.91
RXRBP28702 AC243562.2-201ENST00000561247 970 ntBASIC20.74■□□□□ 0.91
RXRBP28702 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC20.74■□□□□ 0.91
RXRBP28702 YRDCP1-201ENST00000621419 643 ntBASIC20.74■□□□□ 0.91
RXRBP28702 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RXRBP28702 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RXRBP28702 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RXRBP28702 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RXRBP28702 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RXRBP28702 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RXRBP28702 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RXRBP28702 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.73■□□□□ 0.91
RXRBP28702 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RXRBP28702 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RXRBP28702 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RXRBP28702 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.73■□□□□ 0.91
RXRBP28702 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RXRBP28702 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC20.73■□□□□ 0.91
RXRBP28702 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC20.73■□□□□ 0.91
RXRBP28702 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC20.73■□□□□ 0.91
RXRBP28702 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RXRBP28702 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RXRBP28702 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.73■□□□□ 0.91
RXRBP28702 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC20.73■□□□□ 0.91
RXRBP28702 AC242376.1-201ENST00000559033 726 ntBASIC20.73■□□□□ 0.91
RXRBP28702 RN7SL713P-201ENST00000582127 302 ntBASIC20.73■□□□□ 0.91
RXRBP28702 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RXRBP28702 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC20.73■□□□□ 0.91
RXRBP28702 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RXRBP28702 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC20.73■□□□□ 0.91
RXRBP28702 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
RXRBP28702 PRSS30P-206ENST00000641773 873 ntBASIC20.73■□□□□ 0.91
RXRBP28702 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RXRBP28702 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.73■□□□□ 0.91
RXRBP28702 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RXRBP28702 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.73■□□□□ 0.91
RXRBP28702 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RXRBP28702 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RXRBP28702 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RXRBP28702 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RXRBP28702 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RXRBP28702 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RXRBP28702 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RXRBP28702 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RXRBP28702 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RXRBP28702 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RXRBP28702 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RXRBP28702 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RXRBP28702 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RXRBP28702 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RXRBP28702 HPGD-203ENST00000422112 805 ntTSL 2 BASIC20.72■□□□□ 0.91
RXRBP28702 AC079112.1-201ENST00000454972 939 ntBASIC20.72■□□□□ 0.91
RXRBP28702 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC20.72■□□□□ 0.91
RXRBP28702 NCK2-206ENST00000522586 490 ntTSL 5 BASIC20.72■□□□□ 0.91
RXRBP28702 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RXRBP28702 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC20.72■□□□□ 0.91
RXRBP28702 FO393412.1-201ENST00000619841 382 ntBASIC20.72■□□□□ 0.91
RXRBP28702 CDK7-214ENST00000626796 358 ntTSL 5 BASIC20.72■□□□□ 0.91
RXRBP28702 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC20.72■□□□□ 0.91
RXRBP28702 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RXRBP28702 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.72■□□□□ 0.91
RXRBP28702 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC20.72■□□□□ 0.91
RXRBP28702 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RXRBP28702 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms