Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CD40P25942 CYP4F24P-201ENST00000586049 1580 ntBASIC13.94□□□□□ -0.18
CD40P25942 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.94□□□□□ -0.18
CD40P25942 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CD40P25942 MIR6069-201ENST00000620069 79 ntBASIC13.94□□□□□ -0.18
CD40P25942 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CD40P25942 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.94□□□□□ -0.18
CD40P25942 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.93□□□□□ -0.18
CD40P25942 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.93□□□□□ -0.18
CD40P25942 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CD40P25942 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.93□□□□□ -0.18
CD40P25942 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CD40P25942 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CD40P25942 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
CD40P25942 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
CD40P25942 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CD40P25942 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.93□□□□□ -0.18
CD40P25942 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.93□□□□□ -0.18
CD40P25942 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.93□□□□□ -0.18
CD40P25942 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.93□□□□□ -0.18
CD40P25942 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.93□□□□□ -0.18
CD40P25942 AC135586.1-201ENST00000539323 574 ntBASIC13.93□□□□□ -0.18
CD40P25942 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CD40P25942 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 AC004233.3-201ENST00000607794 1269 ntBASIC13.93□□□□□ -0.18
CD40P25942 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.93□□□□□ -0.18
CD40P25942 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.93□□□□□ -0.18
CD40P25942 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CD40P25942 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.93□□□□□ -0.18
CD40P25942 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.93□□□□□ -0.18
CD40P25942 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD40P25942 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD40P25942 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD40P25942 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CD40P25942 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD40P25942 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD40P25942 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD40P25942 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CD40P25942 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD40P25942 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.92□□□□□ -0.18
CD40P25942 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.92□□□□□ -0.18
CD40P25942 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.92□□□□□ -0.18
CD40P25942 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD40P25942 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD40P25942 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD40P25942 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CD40P25942 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CD40P25942 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD40P25942 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD40P25942 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CD40P25942 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CD40P25942 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD40P25942 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD40P25942 PIN1P1-201ENST00000412108 996 ntBASIC13.92□□□□□ -0.18
CD40P25942 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.92□□□□□ -0.18
CD40P25942 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.92□□□□□ -0.18
CD40P25942 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.92□□□□□ -0.18
CD40P25942 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.92□□□□□ -0.18
CD40P25942 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms