Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.69□□□□□ -0.22
COL8A2P25067 COX20P2-201ENST00000452636 358 ntBASIC13.69□□□□□ -0.22
COL8A2P25067 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
COL8A2P25067 AL079307.3-201ENST00000556114 283 ntBASIC13.69□□□□□ -0.22
COL8A2P25067 TEX28P1-201ENST00000613479 1221 ntBASIC13.69□□□□□ -0.22
COL8A2P25067 TEX28P2-201ENST00000617764 1221 ntBASIC13.69□□□□□ -0.22
COL8A2P25067 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.69□□□□□ -0.22
COL8A2P25067 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.69□□□□□ -0.22
COL8A2P25067 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 U82695.1-201ENST00000635752 1889 ntBASIC13.69□□□□□ -0.22
COL8A2P25067 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
COL8A2P25067 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.69□□□□□ -0.22
COL8A2P25067 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
COL8A2P25067 PAUPAR-201ENST00000630360 2965 ntBASIC13.68□□□□□ -0.22
COL8A2P25067 AC092364.2-201ENST00000596710 2692 ntBASIC13.68□□□□□ -0.22
COL8A2P25067 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.68□□□□□ -0.22
COL8A2P25067 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.68□□□□□ -0.22
COL8A2P25067 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
COL8A2P25067 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.68□□□□□ -0.22
COL8A2P25067 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
COL8A2P25067 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
COL8A2P25067 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.68□□□□□ -0.22
COL8A2P25067 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.68□□□□□ -0.22
COL8A2P25067 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.68□□□□□ -0.22
COL8A2P25067 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.68□□□□□ -0.22
COL8A2P25067 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.68□□□□□ -0.22
COL8A2P25067 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.68□□□□□ -0.22
COL8A2P25067 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.68□□□□□ -0.22
COL8A2P25067 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
COL8A2P25067 AC008761.3-201ENST00000624803 892 ntBASIC13.68□□□□□ -0.22
COL8A2P25067 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.68□□□□□ -0.22
COL8A2P25067 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.68□□□□□ -0.22
COL8A2P25067 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
COL8A2P25067 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL8A2P25067 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.67□□□□□ -0.22
COL8A2P25067 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
COL8A2P25067 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 AC022144.1-201ENST00000602255 1580 ntBASIC13.67□□□□□ -0.22
COL8A2P25067 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.67□□□□□ -0.22
COL8A2P25067 AC005052.1-201ENST00000625181 2492 ntBASIC13.67□□□□□ -0.22
COL8A2P25067 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
COL8A2P25067 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.67□□□□□ -0.22
COL8A2P25067 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.67□□□□□ -0.22
COL8A2P25067 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 ALOX12P2-203ENST00000570921 1945 ntBASIC13.67□□□□□ -0.22
COL8A2P25067 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.67□□□□□ -0.22
COL8A2P25067 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.67□□□□□ -0.22
COL8A2P25067 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.67□□□□□ -0.22
COL8A2P25067 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL8A2P25067 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.67□□□□□ -0.22
COL8A2P25067 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms