Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL3L1P16619 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CCL3L1P16619 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCL3L1P16619 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.39□□□□□ -0.27
CCL3L1P16619 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL3L1P16619 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL3L1P16619 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCL3L1P16619 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.39□□□□□ -0.27
CCL3L1P16619 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.39□□□□□ -0.27
CCL3L1P16619 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL3L1P16619 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL3L1P16619 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CCL3L1P16619 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CCL3L1P16619 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL3L1P16619 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 PCDHA1-201ENST00000378133 2726 ntBASIC13.38□□□□□ -0.27
CCL3L1P16619 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL3L1P16619 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
CCL3L1P16619 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CCL3L1P16619 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.38□□□□□ -0.27
CCL3L1P16619 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.38□□□□□ -0.27
CCL3L1P16619 SPDYE14P-201ENST00000442619 822 ntBASIC13.38□□□□□ -0.27
CCL3L1P16619 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL3L1P16619 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL3L1P16619 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.38□□□□□ -0.27
CCL3L1P16619 AC026150.2-201ENST00000564693 1156 ntBASIC13.38□□□□□ -0.27
CCL3L1P16619 AC024267.1-201ENST00000582320 895 ntBASIC13.38□□□□□ -0.27
CCL3L1P16619 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.38□□□□□ -0.27
CCL3L1P16619 MIR4321-201ENST00000592276 80 ntBASIC13.38□□□□□ -0.27
CCL3L1P16619 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
CCL3L1P16619 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 LINC00628-201ENST00000628516 1289 ntBASIC13.38□□□□□ -0.27
CCL3L1P16619 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL3L1P16619 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.38□□□□□ -0.27
CCL3L1P16619 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.38□□□□□ -0.27
CCL3L1P16619 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CCL3L1P16619 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL3L1P16619 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.38□□□□□ -0.27
CCL3L1P16619 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL3L1P16619 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL3L1P16619 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.37□□□□□ -0.27
CCL3L1P16619 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL3L1P16619 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL3L1P16619 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.37□□□□□ -0.27
CCL3L1P16619 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CCL3L1P16619 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.37□□□□□ -0.27
CCL3L1P16619 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL3L1P16619 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL3L1P16619 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL3L1P16619 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.37□□□□□ -0.27
CCL3L1P16619 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.37□□□□□ -0.27
CCL3L1P16619 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.37□□□□□ -0.27
CCL3L1P16619 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CCL3L1P16619 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.37□□□□□ -0.27
CCL3L1P16619 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL3L1P16619 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL3L1P16619 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL3L1P16619 AL139400.1-201ENST00000366220 510 ntBASIC13.37□□□□□ -0.27
CCL3L1P16619 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL3L1P16619 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.37□□□□□ -0.27
CCL3L1P16619 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL3L1P16619 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.37□□□□□ -0.27
CCL3L1P16619 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.37□□□□□ -0.27
CCL3L1P16619 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL3L1P16619 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL3L1P16619 AC061975.2-201ENST00000581722 295 ntBASIC13.37□□□□□ -0.27
CCL3L1P16619 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL3L1P16619 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.37□□□□□ -0.27
CCL3L1P16619 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms