Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A1P11836 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
MS4A1P11836 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A1P11836 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
MS4A1P11836 AC140113.2-201ENST00000604370 208 ntBASIC20.85■□□□□ 0.93
MS4A1P11836 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.85■□□□□ 0.93
MS4A1P11836 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.85■□□□□ 0.93
MS4A1P11836 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC20.85■□□□□ 0.93
MS4A1P11836 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.85■□□□□ 0.93
MS4A1P11836 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A1P11836 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC20.85■□□□□ 0.93
MS4A1P11836 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.85■□□□□ 0.93
MS4A1P11836 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A1P11836 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.85■□□□□ 0.93
MS4A1P11836 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A1P11836 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A1P11836 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MS4A1P11836 AC068418.2-201ENST00000577309 3703 ntBASIC20.85■□□□□ 0.93
MS4A1P11836 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A1P11836 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A1P11836 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A1P11836 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
MS4A1P11836 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC20.84■□□□□ 0.93
MS4A1P11836 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A1P11836 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
MS4A1P11836 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A1P11836 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A1P11836 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
MS4A1P11836 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A1P11836 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.84■□□□□ 0.93
MS4A1P11836 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A1P11836 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A1P11836 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.84■□□□□ 0.93
MS4A1P11836 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
MS4A1P11836 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.84■□□□□ 0.93
MS4A1P11836 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.84■□□□□ 0.93
MS4A1P11836 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A1P11836 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.84■□□□□ 0.93
MS4A1P11836 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A1P11836 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A1P11836 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC20.84■□□□□ 0.93
MS4A1P11836 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A1P11836 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
MS4A1P11836 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
MS4A1P11836 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A1P11836 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A1P11836 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
MS4A1P11836 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A1P11836 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
MS4A1P11836 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.84■□□□□ 0.93
MS4A1P11836 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MS4A1P11836 ACE-203ENST00000413513 2237 ntTSL 2 BASIC20.84■□□□□ 0.93
MS4A1P11836 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A1P11836 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A1P11836 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC20.83■□□□□ 0.93
MS4A1P11836 PMS2P7-201ENST00000506558 1336 ntBASIC20.83■□□□□ 0.93
MS4A1P11836 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A1P11836 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A1P11836 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A1P11836 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A1P11836 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
MS4A1P11836 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
MS4A1P11836 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC20.83■□□□□ 0.93
MS4A1P11836 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A1P11836 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A1P11836 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A1P11836 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A1P11836 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A1P11836 AC026396.1-201ENST00000419388 421 ntBASIC20.83■□□□□ 0.93
MS4A1P11836 SLC25A1P1-201ENST00000528351 927 ntBASIC20.83■□□□□ 0.93
MS4A1P11836 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A1P11836 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MS4A1P11836 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
MS4A1P11836 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
MS4A1P11836 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
MS4A1P11836 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.83■□□□□ 0.92
MS4A1P11836 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
MS4A1P11836 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC20.83■□□□□ 0.92
MS4A1P11836 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.83■□□□□ 0.92
MS4A1P11836 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.83■□□□□ 0.92
MS4A1P11836 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
MS4A1P11836 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MS4A1P11836 LINC02447-202ENST00000501888 2146 ntBASIC20.83■□□□□ 0.92
MS4A1P11836 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A1P11836 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
MS4A1P11836 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A1P11836 AC069224.1-201ENST00000566372 1715 ntBASIC20.82■□□□□ 0.92
MS4A1P11836 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A1P11836 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A1P11836 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
MS4A1P11836 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
MS4A1P11836 PRYP6-201ENST00000514804 343 ntBASIC20.82■□□□□ 0.92
MS4A1P11836 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MS4A1P11836 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
MS4A1P11836 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
MS4A1P11836 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
MS4A1P11836 AC002347.1-201ENST00000569543 541 ntBASIC20.82■□□□□ 0.92
MS4A1P11836 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.82■□□□□ 0.92
MS4A1P11836 AL513190.1-201ENST00000621254 727 ntBASIC20.82■□□□□ 0.92
MS4A1P11836 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms