Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.91■□□□□ 0.94
COL5A2P05997 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL5A2P05997 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
COL5A2P05997 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.91■□□□□ 0.94
COL5A2P05997 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL5A2P05997 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL5A2P05997 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL5A2P05997 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL5A2P05997 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL5A2P05997 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.91■□□□□ 0.94
COL5A2P05997 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.9■□□□□ 0.94
COL5A2P05997 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL5A2P05997 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.9■□□□□ 0.94
COL5A2P05997 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL5A2P05997 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC20.9■□□□□ 0.94
COL5A2P05997 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL5A2P05997 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL5A2P05997 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL5A2P05997 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC20.9■□□□□ 0.94
COL5A2P05997 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
COL5A2P05997 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC20.9■□□□□ 0.94
COL5A2P05997 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC20.9■□□□□ 0.94
COL5A2P05997 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC20.9■□□□□ 0.94
COL5A2P05997 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL5A2P05997 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL5A2P05997 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL5A2P05997 UBALD1-205ENST00000590891 2641 ntBASIC20.9■□□□□ 0.94
COL5A2P05997 AHCYP2-201ENST00000430630 1300 ntBASIC20.89■□□□□ 0.94
COL5A2P05997 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL5A2P05997 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
COL5A2P05997 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL5A2P05997 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL5A2P05997 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL5A2P05997 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
COL5A2P05997 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC20.89■□□□□ 0.94
COL5A2P05997 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC20.89■□□□□ 0.94
COL5A2P05997 REEP1-202ENST00000453231 940 ntTSL 2 BASIC20.89■□□□□ 0.94
COL5A2P05997 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC20.89■□□□□ 0.94
COL5A2P05997 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC20.89■□□□□ 0.94
COL5A2P05997 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC20.89■□□□□ 0.94
COL5A2P05997 AC145423.3-201ENST00000615987 467 ntBASIC20.89■□□□□ 0.94
COL5A2P05997 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL5A2P05997 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
COL5A2P05997 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL5A2P05997 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.89■□□□□ 0.93
COL5A2P05997 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL5A2P05997 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL5A2P05997 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL5A2P05997 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
COL5A2P05997 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.89■□□□□ 0.93
COL5A2P05997 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL5A2P05997 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC20.89■□□□□ 0.93
COL5A2P05997 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC20.89■□□□□ 0.93
COL5A2P05997 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL5A2P05997 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL5A2P05997 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC20.88■□□□□ 0.93
COL5A2P05997 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC20.88■□□□□ 0.93
COL5A2P05997 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL5A2P05997 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL5A2P05997 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
COL5A2P05997 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL5A2P05997 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
COL5A2P05997 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC20.88■□□□□ 0.93
COL5A2P05997 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC20.88■□□□□ 0.93
COL5A2P05997 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC20.88■□□□□ 0.93
COL5A2P05997 AC016629.1-201ENST00000596579 586 ntBASIC20.88■□□□□ 0.93
COL5A2P05997 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC20.88■□□□□ 0.93
COL5A2P05997 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL5A2P05997 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC20.88■□□□□ 0.93
COL5A2P05997 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL5A2P05997 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.88■□□□□ 0.93
COL5A2P05997 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.88■□□□□ 0.93
COL5A2P05997 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC20.88■□□□□ 0.93
COL5A2P05997 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
COL5A2P05997 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL5A2P05997 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL5A2P05997 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL5A2P05997 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL5A2P05997 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL5A2P05997 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL5A2P05997 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL5A2P05997 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC20.88■□□□□ 0.93
COL5A2P05997 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC20.88■□□□□ 0.93
COL5A2P05997 APOA2-204ENST00000464492 530 ntTSL 3 BASIC20.88■□□□□ 0.93
COL5A2P05997 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC20.88■□□□□ 0.93
COL5A2P05997 ADM-202ENST00000524948 584 ntTSL 2 BASIC20.88■□□□□ 0.93
COL5A2P05997 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC20.88■□□□□ 0.93
COL5A2P05997 AC079328.1-201ENST00000560358 952 ntBASIC20.88■□□□□ 0.93
COL5A2P05997 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC20.88■□□□□ 0.93
COL5A2P05997 AP005019.2-201ENST00000615104 511 ntBASIC20.88■□□□□ 0.93
COL5A2P05997 AC244452.3-201ENST00000636814 210 ntBASIC20.88■□□□□ 0.93
COL5A2P05997 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL5A2P05997 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC20.88■□□□□ 0.93
COL5A2P05997 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC20.87■□□□□ 0.93
COL5A2P05997 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL5A2P05997 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.87■□□□□ 0.93
COL5A2P05997 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL5A2P05997 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL5A2P05997 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.87■□□□□ 0.93
COL5A2P05997 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms