Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.47■□□□□ 0.71
APPP05067 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.47■□□□□ 0.71
APPP05067 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.47■□□□□ 0.71
APPP05067 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
APPP05067 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
APPP05067 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APPP05067 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
APPP05067 AC093512.1-201ENST00000617969 520 ntBASIC19.47■□□□□ 0.71
APPP05067 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
APPP05067 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
APPP05067 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APPP05067 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.47■□□□□ 0.71
APPP05067 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
APPP05067 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APPP05067 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.47■□□□□ 0.71
APPP05067 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APPP05067 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
APPP05067 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
APPP05067 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
APPP05067 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
APPP05067 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.47■□□□□ 0.71
APPP05067 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.47■□□□□ 0.71
APPP05067 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APPP05067 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.47■□□□□ 0.71
APPP05067 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APPP05067 AL592424.1-201ENST00000563624 1536 ntBASIC19.46■□□□□ 0.71
APPP05067 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
APPP05067 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APPP05067 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APPP05067 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
APPP05067 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APPP05067 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
APPP05067 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
APPP05067 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
APPP05067 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
APPP05067 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.46■□□□□ 0.71
APPP05067 AL353705.2-201ENST00000428243 662 ntBASIC19.46■□□□□ 0.71
APPP05067 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.46■□□□□ 0.71
APPP05067 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.46■□□□□ 0.71
APPP05067 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.46■□□□□ 0.71
APPP05067 AC125807.1-201ENST00000483097 614 ntBASIC19.46■□□□□ 0.71
APPP05067 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.46■□□□□ 0.71
APPP05067 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APPP05067 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.46■□□□□ 0.71
APPP05067 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.46■□□□□ 0.71
APPP05067 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
APPP05067 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
APPP05067 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.46■□□□□ 0.71
APPP05067 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.46■□□□□ 0.71
APPP05067 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APPP05067 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
APPP05067 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.46■□□□□ 0.71
APPP05067 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
APPP05067 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APPP05067 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APPP05067 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APPP05067 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APPP05067 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
APPP05067 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
APPP05067 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.45■□□□□ 0.7
APPP05067 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.45■□□□□ 0.7
APPP05067 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APPP05067 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APPP05067 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APPP05067 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
APPP05067 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APPP05067 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.45■□□□□ 0.7
APPP05067 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.45■□□□□ 0.7
APPP05067 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
APPP05067 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.45■□□□□ 0.7
APPP05067 KLF2P3-201ENST00000451977 1087 ntBASIC19.45■□□□□ 0.7
APPP05067 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.45■□□□□ 0.7
APPP05067 AC067863.1-201ENST00000494933 530 ntBASIC19.45■□□□□ 0.7
APPP05067 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
APPP05067 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.45■□□□□ 0.7
APPP05067 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APPP05067 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.45■□□□□ 0.7
APPP05067 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.45■□□□□ 0.7
APPP05067 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APPP05067 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APPP05067 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.45■□□□□ 0.7
APPP05067 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APPP05067 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APPP05067 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APPP05067 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.45■□□□□ 0.7
APPP05067 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
APPP05067 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APPP05067 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
APPP05067 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APPP05067 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APPP05067 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APPP05067 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
APPP05067 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APPP05067 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
APPP05067 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APPP05067 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
APPP05067 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.44■□□□□ 0.7
APPP05067 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
APPP05067 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.44■□□□□ 0.7
APPP05067 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms