Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC18.9■□□□□ 0.62
MYCNP04198 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.9■□□□□ 0.62
MYCNP04198 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC18.9■□□□□ 0.62
MYCNP04198 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.9■□□□□ 0.62
MYCNP04198 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC18.9■□□□□ 0.62
MYCNP04198 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.9■□□□□ 0.62
MYCNP04198 AL662799.1-202ENST00000614205 422 ntBASIC18.9■□□□□ 0.62
MYCNP04198 Metazoa_SRP.125-201ENST00000618659 283 ntBASIC18.9■□□□□ 0.62
MYCNP04198 Z99129.2-201ENST00000619967 314 ntBASIC18.9■□□□□ 0.62
MYCNP04198 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 CIR1P2-201ENST00000514821 1342 ntBASIC18.9■□□□□ 0.62
MYCNP04198 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.9■□□□□ 0.62
MYCNP04198 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
MYCNP04198 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.9■□□□□ 0.62
MYCNP04198 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MYCNP04198 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
MYCNP04198 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.89■□□□□ 0.62
MYCNP04198 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
MYCNP04198 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
MYCNP04198 AC103702.1-201ENST00000548801 2630 ntBASIC18.89■□□□□ 0.62
MYCNP04198 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
MYCNP04198 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.89■□□□□ 0.62
MYCNP04198 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
MYCNP04198 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
MYCNP04198 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
MYCNP04198 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.89■□□□□ 0.61
MYCNP04198 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.89■□□□□ 0.61
MYCNP04198 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
MYCNP04198 AC012317.2-201ENST00000623305 2251 ntBASIC18.89■□□□□ 0.61
MYCNP04198 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.89■□□□□ 0.61
MYCNP04198 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.89■□□□□ 0.61
MYCNP04198 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.89■□□□□ 0.61
MYCNP04198 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
MYCNP04198 OR8S1-201ENST00000310194 1080 ntBASIC18.89■□□□□ 0.61
MYCNP04198 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 CCL7-201ENST00000378569 810 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.89■□□□□ 0.61
MYCNP04198 CCL7-202ENST00000394627 696 ntTSL 3 BASIC18.89■□□□□ 0.61
MYCNP04198 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.89■□□□□ 0.61
MYCNP04198 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC18.89■□□□□ 0.61
MYCNP04198 MTND4P6-201ENST00000438297 472 ntBASIC18.89■□□□□ 0.61
MYCNP04198 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC18.89■□□□□ 0.61
MYCNP04198 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.89■□□□□ 0.61
MYCNP04198 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC18.89■□□□□ 0.61
MYCNP04198 LINC01377-201ENST00000505396 649 ntTSL 2 BASIC18.89■□□□□ 0.61
MYCNP04198 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.89■□□□□ 0.61
MYCNP04198 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC18.89■□□□□ 0.61
MYCNP04198 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.89■□□□□ 0.61
MYCNP04198 LINC02251-201ENST00000554798 1224 ntTSL 5 BASIC18.89■□□□□ 0.61
MYCNP04198 CD226-202ENST00000577287 1009 ntTSL 3 BASIC18.89■□□□□ 0.61
MYCNP04198 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
MYCNP04198 AL031055.1-201ENST00000606362 631 ntBASIC18.89■□□□□ 0.61
MYCNP04198 AL391834.1-201ENST00000609609 560 ntBASIC18.89■□□□□ 0.61
MYCNP04198 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.89■□□□□ 0.61
MYCNP04198 LINC01451-201ENST00000623792 534 ntBASIC18.89■□□□□ 0.61
MYCNP04198 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
MYCNP04198 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
MYCNP04198 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.89■□□□□ 0.61
MYCNP04198 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.89■□□□□ 0.61
MYCNP04198 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 AC012321.1-201ENST00000561622 1588 ntBASIC18.89■□□□□ 0.61
MYCNP04198 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.89■□□□□ 0.61
MYCNP04198 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.89■□□□□ 0.61
MYCNP04198 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 AC016027.1-202ENST00000607927 1699 ntBASIC18.89■□□□□ 0.61
MYCNP04198 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MYCNP04198 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MYCNP04198 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MYCNP04198 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MYCNP04198 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MYCNP04198 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MYCNP04198 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MYCNP04198 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MYCNP04198 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MYCNP04198 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms