Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
APOBP04114 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
APOBP04114 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC9.87□□□□□ -0.83
APOBP04114 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC9.87□□□□□ -0.83
APOBP04114 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC9.87□□□□□ -0.83
APOBP04114 AL691432.1-201ENST00000596308 1422 ntBASIC9.87□□□□□ -0.83
APOBP04114 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
APOBP04114 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC9.87□□□□□ -0.83
APOBP04114 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC9.87□□□□□ -0.83
APOBP04114 PPY2P-201ENST00000582808 702 ntBASIC9.87□□□□□ -0.83
APOBP04114 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 RN7SL736P-201ENST00000613111 269 ntBASIC9.87□□□□□ -0.83
APOBP04114 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC9.87□□□□□ -0.83
APOBP04114 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
APOBP04114 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC9.87□□□□□ -0.83
APOBP04114 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
APOBP04114 RNF216P1-203ENST00000404404 2427 ntBASIC9.87□□□□□ -0.83
APOBP04114 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
APOBP04114 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC9.87□□□□□ -0.83
APOBP04114 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC9.87□□□□□ -0.83
APOBP04114 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
APOBP04114 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC9.87□□□□□ -0.83
APOBP04114 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
APOBP04114 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC9.87□□□□□ -0.83
APOBP04114 AC007613.1-201ENST00000572811 2597 ntBASIC9.87□□□□□ -0.83
APOBP04114 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC9.87□□□□□ -0.83
APOBP04114 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC9.87□□□□□ -0.83
APOBP04114 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC9.87□□□□□ -0.83
APOBP04114 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC9.87□□□□□ -0.83
APOBP04114 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC9.87□□□□□ -0.83
APOBP04114 AC126915.1-201ENST00000522847 1038 ntBASIC9.87□□□□□ -0.83
APOBP04114 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC9.87□□□□□ -0.83
APOBP04114 RN7SL713P-201ENST00000582127 302 ntBASIC9.87□□□□□ -0.83
APOBP04114 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC9.87□□□□□ -0.83
APOBP04114 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC9.87□□□□□ -0.83
APOBP04114 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC9.87□□□□□ -0.83
APOBP04114 AC068880.1-201ENST00000507289 2297 ntBASIC9.86□□□□□ -0.83
APOBP04114 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
APOBP04114 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC9.86□□□□□ -0.83
APOBP04114 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC9.86□□□□□ -0.83
APOBP04114 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC9.86□□□□□ -0.83
APOBP04114 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 SMS-201ENST00000379404 1174 ntTSL 3 BASIC9.86□□□□□ -0.83
APOBP04114 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC9.86□□□□□ -0.83
APOBP04114 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC9.86□□□□□ -0.83
APOBP04114 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 AC022217.1-201ENST00000521069 738 ntBASIC9.86□□□□□ -0.83
APOBP04114 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC9.86□□□□□ -0.83
APOBP04114 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC9.86□□□□□ -0.83
APOBP04114 RPL35-206ENST00000629845 340 ntTSL 5 BASIC9.86□□□□□ -0.83
APOBP04114 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC9.86□□□□□ -0.83
APOBP04114 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
APOBP04114 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC9.86□□□□□ -0.83
APOBP04114 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC9.86□□□□□ -0.83
APOBP04114 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 USP40-206ENST00000443711 628 ntTSL 2 BASIC9.86□□□□□ -0.83
APOBP04114 CEP164P1-201ENST00000455142 418 ntBASIC9.86□□□□□ -0.83
APOBP04114 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC9.86□□□□□ -0.83
APOBP04114 RPSAP36-202ENST00000494591 1261 ntBASIC9.86□□□□□ -0.83
APOBP04114 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC9.86□□□□□ -0.83
APOBP04114 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
APOBP04114 AC008132.1-202ENST00000342005 1389 ntBASIC9.86□□□□□ -0.83
APOBP04114 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
APOBP04114 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms