Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.19■□□□□ 0.02
OPN1SWP03999 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
OPN1SWP03999 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
OPN1SWP03999 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.19■□□□□ 0.02
OPN1SWP03999 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.19■□□□□ 0.02
OPN1SWP03999 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.19■□□□□ 0.02
OPN1SWP03999 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
OPN1SWP03999 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.19■□□□□ 0.02
OPN1SWP03999 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
OPN1SWP03999 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
OPN1SWP03999 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.19■□□□□ 0.02
OPN1SWP03999 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
OPN1SWP03999 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
OPN1SWP03999 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
OPN1SWP03999 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
OPN1SWP03999 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
OPN1SWP03999 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
OPN1SWP03999 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.19■□□□□ 0.02
OPN1SWP03999 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
OPN1SWP03999 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
OPN1SWP03999 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
OPN1SWP03999 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
OPN1SWP03999 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
OPN1SWP03999 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.18■□□□□ 0.02
OPN1SWP03999 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
OPN1SWP03999 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.18■□□□□ 0.02
OPN1SWP03999 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.18■□□□□ 0.02
OPN1SWP03999 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
OPN1SWP03999 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.18■□□□□ 0.02
OPN1SWP03999 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
OPN1SWP03999 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 AC079781.3-201ENST00000449110 356 ntBASIC15.18■□□□□ 0.02
OPN1SWP03999 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 AC108751.1-201ENST00000490852 363 ntBASIC15.18■□□□□ 0.02
OPN1SWP03999 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.18■□□□□ 0.02
OPN1SWP03999 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.18■□□□□ 0.02
OPN1SWP03999 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
OPN1SWP03999 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 AL049840.3-201ENST00000602669 611 ntBASIC15.18■□□□□ 0.02
OPN1SWP03999 FAM215A-202ENST00000632077 792 ntBASIC15.18■□□□□ 0.02
OPN1SWP03999 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
OPN1SWP03999 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 AC016027.1-202ENST00000607927 1699 ntBASIC15.18■□□□□ 0.02
OPN1SWP03999 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.18■□□□□ 0.02
OPN1SWP03999 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.18■□□□□ 0.02
OPN1SWP03999 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
OPN1SWP03999 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
OPN1SWP03999 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.18■□□□□ 0.02
OPN1SWP03999 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.18■□□□□ 0.02
OPN1SWP03999 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
OPN1SWP03999 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
OPN1SWP03999 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
OPN1SWP03999 AC092919.2-201ENST00000623631 1645 ntBASIC15.17■□□□□ 0.02
OPN1SWP03999 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
OPN1SWP03999 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
OPN1SWP03999 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
OPN1SWP03999 CICP13-201ENST00000422015 2789 ntBASIC15.17■□□□□ 0.02
OPN1SWP03999 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
OPN1SWP03999 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
OPN1SWP03999 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.17■□□□□ 0.02
OPN1SWP03999 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.17■□□□□ 0.02
OPN1SWP03999 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
OPN1SWP03999 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
OPN1SWP03999 AC008677.1-201ENST00000519230 1561 ntBASIC15.17■□□□□ 0.02
OPN1SWP03999 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
OPN1SWP03999 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.17■□□□□ 0.02
OPN1SWP03999 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.17■□□□□ 0.02
OPN1SWP03999 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.17■□□□□ 0.02
OPN1SWP03999 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.17■□□□□ 0.02
OPN1SWP03999 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.17■□□□□ 0.02
OPN1SWP03999 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
OPN1SWP03999 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
OPN1SWP03999 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
OPN1SWP03999 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
OPN1SWP03999 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
OPN1SWP03999 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
OPN1SWP03999 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
OPN1SWP03999 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
OPN1SWP03999 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
OPN1SWP03999 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms