Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV12-3P01733 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.54□□□□□ -0.4
TRBV12-3P01733 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.53□□□□□ -0.4
TRBV12-3P01733 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 HLA-J-203ENST00000494367 1087 ntBASIC12.53□□□□□ -0.4
TRBV12-3P01733 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 AC004449.1-201ENST00000564240 433 ntBASIC12.53□□□□□ -0.4
TRBV12-3P01733 MIR4321-201ENST00000592276 80 ntBASIC12.53□□□□□ -0.4
TRBV12-3P01733 MIR6080-201ENST00000617359 66 ntBASIC12.53□□□□□ -0.4
TRBV12-3P01733 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.53□□□□□ -0.4
TRBV12-3P01733 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRBV12-3P01733 AP003680.1-201ENST00000598970 3660 ntBASIC12.52□□□□□ -0.4
TRBV12-3P01733 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.52□□□□□ -0.4
TRBV12-3P01733 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
TRBV12-3P01733 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRBV12-3P01733 AC008677.1-201ENST00000519230 1561 ntBASIC12.52□□□□□ -0.4
TRBV12-3P01733 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TRBV12-3P01733 AC026691.1-201ENST00000602502 2017 ntBASIC12.52□□□□□ -0.4
TRBV12-3P01733 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.52□□□□□ -0.4
TRBV12-3P01733 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.52□□□□□ -0.4
TRBV12-3P01733 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRBV12-3P01733 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TRBV12-3P01733 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
TRBV12-3P01733 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
TRBV12-3P01733 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRBV12-3P01733 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRBV12-3P01733 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRBV12-3P01733 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRBV12-3P01733 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRBV12-3P01733 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRBV12-3P01733 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 AC092183.1-201ENST00000469884 875 ntBASIC12.52□□□□□ -0.41
TRBV12-3P01733 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 AL365330.1-201ENST00000607459 531 ntBASIC12.52□□□□□ -0.41
TRBV12-3P01733 AC003101.2-201ENST00000612557 442 ntBASIC12.52□□□□□ -0.41
TRBV12-3P01733 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRBV12-3P01733 Z92544.3-201ENST00000624747 417 ntBASIC12.52□□□□□ -0.41
TRBV12-3P01733 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms