Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM3O75382 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.19■□□□□ 0.02
TRIM3O75382 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM3O75382 AC079140.1-201ENST00000508039 487 ntBASIC15.19■□□□□ 0.02
TRIM3O75382 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM3O75382 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRIM3O75382 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.19■□□□□ 0.02
TRIM3O75382 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRIM3O75382 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRIM3O75382 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM3O75382 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM3O75382 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRIM3O75382 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM3O75382 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
TRIM3O75382 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
TRIM3O75382 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRIM3O75382 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM3O75382 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
TRIM3O75382 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM3O75382 AL671710.1-201ENST00000610245 2349 ntBASIC15.18■□□□□ 0.02
TRIM3O75382 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
TRIM3O75382 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM3O75382 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.18■□□□□ 0.02
TRIM3O75382 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.18■□□□□ 0.02
TRIM3O75382 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM3O75382 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM3O75382 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM3O75382 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
TRIM3O75382 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM3O75382 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM3O75382 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM3O75382 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM3O75382 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM3O75382 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.18■□□□□ 0.02
TRIM3O75382 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM3O75382 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM3O75382 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM3O75382 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM3O75382 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRIM3O75382 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.18■□□□□ 0.02
TRIM3O75382 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM3O75382 AC027612.4-201ENST00000605371 583 ntBASIC15.18■□□□□ 0.02
TRIM3O75382 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRIM3O75382 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM3O75382 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM3O75382 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.18■□□□□ 0.02
TRIM3O75382 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM3O75382 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM3O75382 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRIM3O75382 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRIM3O75382 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM3O75382 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM3O75382 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM3O75382 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM3O75382 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM3O75382 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM3O75382 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM3O75382 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.18■□□□□ 0.02
TRIM3O75382 AC092384.3-202ENST00000564646 2873 ntBASIC15.18■□□□□ 0.02
TRIM3O75382 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM3O75382 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRIM3O75382 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM3O75382 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRIM3O75382 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.17■□□□□ 0.02
TRIM3O75382 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
TRIM3O75382 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRIM3O75382 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 HLA-J-202ENST00000469281 1241 ntBASIC15.17■□□□□ 0.02
TRIM3O75382 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.17■□□□□ 0.02
TRIM3O75382 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.17■□□□□ 0.02
TRIM3O75382 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM3O75382 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.17■□□□□ 0.02
TRIM3O75382 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM3O75382 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms