Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CDH16O75309 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.43■□□□□ 0.22
CDH16O75309 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.43■□□□□ 0.22
CDH16O75309 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH16O75309 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.43■□□□□ 0.22
CDH16O75309 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH16O75309 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH16O75309 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.43■□□□□ 0.22
CDH16O75309 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.43■□□□□ 0.22
CDH16O75309 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH16O75309 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH16O75309 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
CDH16O75309 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CDH16O75309 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH16O75309 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH16O75309 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH16O75309 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CDH16O75309 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.42■□□□□ 0.22
CDH16O75309 ELK2BP-201ENST00000415014 1224 ntBASIC16.42■□□□□ 0.22
CDH16O75309 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH16O75309 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.42■□□□□ 0.22
CDH16O75309 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH16O75309 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.42■□□□□ 0.22
CDH16O75309 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.42■□□□□ 0.22
CDH16O75309 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CDH16O75309 MTDHP4-201ENST00000600287 670 ntBASIC16.42■□□□□ 0.22
CDH16O75309 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH16O75309 GGTLC5P-201ENST00000617623 998 ntBASIC16.42■□□□□ 0.22
CDH16O75309 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CDH16O75309 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH16O75309 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH16O75309 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH16O75309 AC006504.4-201ENST00000592118 1568 ntBASIC16.42■□□□□ 0.22
CDH16O75309 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH16O75309 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH16O75309 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH16O75309 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CDH16O75309 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH16O75309 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH16O75309 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH16O75309 AL009178.2-201ENST00000597278 2719 ntBASIC16.41■□□□□ 0.22
CDH16O75309 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH16O75309 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH16O75309 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH16O75309 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH16O75309 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH16O75309 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH16O75309 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH16O75309 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH16O75309 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH16O75309 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH16O75309 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH16O75309 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.41■□□□□ 0.22
CDH16O75309 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.41■□□□□ 0.22
CDH16O75309 PRELID1P1-202ENST00000567272 903 ntBASIC16.41■□□□□ 0.22
CDH16O75309 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.41■□□□□ 0.22
CDH16O75309 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.41■□□□□ 0.22
CDH16O75309 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH16O75309 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH16O75309 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH16O75309 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH16O75309 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH16O75309 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH16O75309 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH16O75309 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDH16O75309 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH16O75309 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH16O75309 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms