Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC18O15417 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
TNRC18O15417 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC18O15417 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.09■□□□□ 0.33
TNRC18O15417 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC18O15417 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.09■□□□□ 0.33
TNRC18O15417 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC17.09■□□□□ 0.33
TNRC18O15417 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
TNRC18O15417 HCG18-241ENST00000602290 821 ntTSL 2 BASIC17.09■□□□□ 0.33
TNRC18O15417 AC013467.2-201ENST00000605472 835 ntBASIC17.09■□□□□ 0.33
TNRC18O15417 AC025262.2-201ENST00000623975 1056 ntBASIC17.09■□□□□ 0.33
TNRC18O15417 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.09■□□□□ 0.33
TNRC18O15417 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC18O15417 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC18O15417 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TNRC18O15417 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TNRC18O15417 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.08■□□□□ 0.33
TNRC18O15417 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TNRC18O15417 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TNRC18O15417 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC17.08■□□□□ 0.33
TNRC18O15417 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
TNRC18O15417 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.08■□□□□ 0.33
TNRC18O15417 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.08■□□□□ 0.33
TNRC18O15417 AC021016.3-201ENST00000608367 477 ntBASIC17.08■□□□□ 0.33
TNRC18O15417 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.08■□□□□ 0.33
TNRC18O15417 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TNRC18O15417 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNRC18O15417 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.08■□□□□ 0.33
TNRC18O15417 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.08■□□□□ 0.32
TNRC18O15417 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.08■□□□□ 0.32
TNRC18O15417 GGT4P-201ENST00000623672 1708 ntBASIC17.08■□□□□ 0.32
TNRC18O15417 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.08■□□□□ 0.32
TNRC18O15417 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TNRC18O15417 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.08■□□□□ 0.32
TNRC18O15417 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNRC18O15417 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNRC18O15417 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.08■□□□□ 0.32
TNRC18O15417 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC17.08■□□□□ 0.32
TNRC18O15417 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.08■□□□□ 0.32
TNRC18O15417 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.08■□□□□ 0.32
TNRC18O15417 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNRC18O15417 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TNRC18O15417 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TNRC18O15417 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TNRC18O15417 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.08■□□□□ 0.32
TNRC18O15417 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.08■□□□□ 0.32
TNRC18O15417 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNRC18O15417 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TNRC18O15417 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.08■□□□□ 0.32
TNRC18O15417 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC18O15417 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC18O15417 RNU1-114P-201ENST00000365297 166 ntBASIC17.07■□□□□ 0.32
TNRC18O15417 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.07■□□□□ 0.32
TNRC18O15417 POM121L8P-201ENST00000417732 1281 ntBASIC17.07■□□□□ 0.32
TNRC18O15417 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.07■□□□□ 0.32
TNRC18O15417 POM121L9P-203ENST00000441984 1285 ntBASIC17.07■□□□□ 0.32
TNRC18O15417 AC244197.1-201ENST00000456494 951 ntBASIC17.07■□□□□ 0.32
TNRC18O15417 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17.07■□□□□ 0.32
TNRC18O15417 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.07■□□□□ 0.32
TNRC18O15417 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC18O15417 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.07■□□□□ 0.32
TNRC18O15417 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TNRC18O15417 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC18O15417 IL9RP3-201ENST00000442856 1674 ntBASIC17.07■□□□□ 0.32
TNRC18O15417 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC18O15417 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC18O15417 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.07■□□□□ 0.32
TNRC18O15417 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC18O15417 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC18O15417 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC18O15417 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.07■□□□□ 0.32
TNRC18O15417 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TNRC18O15417 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TNRC18O15417 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC17.07■□□□□ 0.32
TNRC18O15417 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.07■□□□□ 0.32
TNRC18O15417 AC090164.2-201ENST00000611487 516 ntBASIC17.07■□□□□ 0.32
TNRC18O15417 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.07■□□□□ 0.32
TNRC18O15417 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC18O15417 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC18O15417 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.07■□□□□ 0.32
TNRC18O15417 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.07■□□□□ 0.32
TNRC18O15417 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC18O15417 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC18O15417 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC18O15417 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC18O15417 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC18O15417 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC17.07■□□□□ 0.32
TNRC18O15417 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC18O15417 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
TNRC18O15417 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.07■□□□□ 0.32
TNRC18O15417 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TNRC18O15417 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.07■□□□□ 0.32
TNRC18O15417 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC18O15417 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC18O15417 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC18O15417 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC18O15417 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.06■□□□□ 0.32
TNRC18O15417 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC18O15417 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TNRC18O15417 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms