Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.74■□□□□ 0.11
UBFD1O14562 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.74■□□□□ 0.11
UBFD1O14562 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 HLA-A-201ENST00000376802 1334 ntBASIC15.73■□□□□ 0.11
UBFD1O14562 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.73■□□□□ 0.11
UBFD1O14562 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
UBFD1O14562 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.73■□□□□ 0.11
UBFD1O14562 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.73■□□□□ 0.11
UBFD1O14562 GPX1P2-201ENST00000429271 606 ntBASIC15.73■□□□□ 0.11
UBFD1O14562 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.73■□□□□ 0.11
UBFD1O14562 KRT18P2-201ENST00000447938 1258 ntBASIC15.73■□□□□ 0.11
UBFD1O14562 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
UBFD1O14562 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.73■□□□□ 0.11
UBFD1O14562 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.73■□□□□ 0.11
UBFD1O14562 AC079776.4-201ENST00000511039 504 ntBASIC15.73■□□□□ 0.11
UBFD1O14562 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
UBFD1O14562 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.73■□□□□ 0.11
UBFD1O14562 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.73■□□□□ 0.11
UBFD1O14562 AC018845.2-201ENST00000568326 409 ntBASIC15.73■□□□□ 0.11
UBFD1O14562 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.73■□□□□ 0.11
UBFD1O14562 MIR4321-201ENST00000592276 80 ntBASIC15.73■□□□□ 0.11
UBFD1O14562 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.73■□□□□ 0.11
UBFD1O14562 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.73■□□□□ 0.11
UBFD1O14562 AC007064.4-201ENST00000637740 555 ntBASIC15.73■□□□□ 0.11
UBFD1O14562 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.73■□□□□ 0.11
UBFD1O14562 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
UBFD1O14562 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBFD1O14562 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UBFD1O14562 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UBFD1O14562 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBFD1O14562 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.72■□□□□ 0.11
UBFD1O14562 BCAR1-209ENST00000546196 1340 ntBASIC15.72■□□□□ 0.11
UBFD1O14562 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBFD1O14562 TSPY26P-202ENST00000565928 3884 ntBASIC15.72■□□□□ 0.11
UBFD1O14562 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
UBFD1O14562 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
UBFD1O14562 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.72■□□□□ 0.11
UBFD1O14562 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
UBFD1O14562 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBFD1O14562 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBFD1O14562 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
UBFD1O14562 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.72■□□□□ 0.11
UBFD1O14562 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.72■□□□□ 0.11
UBFD1O14562 AC093909.1-201ENST00000504731 1122 ntBASIC15.72■□□□□ 0.11
UBFD1O14562 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
UBFD1O14562 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
UBFD1O14562 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.72■□□□□ 0.11
UBFD1O14562 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBFD1O14562 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBFD1O14562 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
UBFD1O14562 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBFD1O14562 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBFD1O14562 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.72■□□□□ 0.11
UBFD1O14562 AC023157.3-201ENST00000619086 2088 ntBASIC15.72■□□□□ 0.11
UBFD1O14562 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.72■□□□□ 0.11
UBFD1O14562 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UBFD1O14562 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBFD1O14562 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBFD1O14562 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
UBFD1O14562 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBFD1O14562 AC006486.2-201ENST00000624246 2199 ntBASIC15.72■□□□□ 0.11
UBFD1O14562 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.72■□□□□ 0.11
UBFD1O14562 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
UBFD1O14562 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UBFD1O14562 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.72■□□□□ 0.11
UBFD1O14562 AL513477.1-201ENST00000602865 2407 ntBASIC15.72■□□□□ 0.11
UBFD1O14562 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.72■□□□□ 0.11
UBFD1O14562 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.71■□□□□ 0.11
UBFD1O14562 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
UBFD1O14562 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.71■□□□□ 0.11
UBFD1O14562 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.71■□□□□ 0.11
UBFD1O14562 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBFD1O14562 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms