Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLDN5O00501 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN5O00501 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.05■□□□□ 0.32
CLDN5O00501 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN5O00501 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN5O00501 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN5O00501 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN5O00501 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN5O00501 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN5O00501 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN5O00501 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN5O00501 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN5O00501 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CLDN5O00501 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN5O00501 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLDN5O00501 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN5O00501 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN5O00501 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CLDN5O00501 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN5O00501 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLDN5O00501 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CLDN5O00501 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLDN5O00501 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN5O00501 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN5O00501 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN5O00501 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN5O00501 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN5O00501 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.04■□□□□ 0.32
CLDN5O00501 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN5O00501 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.04■□□□□ 0.32
CLDN5O00501 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN5O00501 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN5O00501 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.04■□□□□ 0.32
CLDN5O00501 AL512361.1-201ENST00000554200 418 ntBASIC17.04■□□□□ 0.32
CLDN5O00501 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.04■□□□□ 0.32
CLDN5O00501 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN5O00501 AJ011932.1-201ENST00000621707 465 ntBASIC17.04■□□□□ 0.32
CLDN5O00501 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN5O00501 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLDN5O00501 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.04■□□□□ 0.32
CLDN5O00501 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN5O00501 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN5O00501 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN5O00501 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CLDN5O00501 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN5O00501 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN5O00501 AC134407.2-201ENST00000625089 1978 ntBASIC17.04■□□□□ 0.32
CLDN5O00501 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN5O00501 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN5O00501 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN5O00501 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN5O00501 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN5O00501 KRT8P12-202ENST00000472924 1397 ntBASIC17.03■□□□□ 0.32
CLDN5O00501 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN5O00501 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN5O00501 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLDN5O00501 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CLDN5O00501 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN5O00501 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN5O00501 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN5O00501 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN5O00501 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CLDN5O00501 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLDN5O00501 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CLDN5O00501 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN5O00501 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN5O00501 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN5O00501 SPDYE17-201ENST00000412399 783 ntBASIC17.03■□□□□ 0.32
CLDN5O00501 AC245100.5-201ENST00000452108 331 ntBASIC17.03■□□□□ 0.32
CLDN5O00501 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN5O00501 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.03■□□□□ 0.32
CLDN5O00501 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN5O00501 AC092364.2-202ENST00000597012 1073 ntBASIC17.03■□□□□ 0.32
CLDN5O00501 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN5O00501 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN5O00501 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN5O00501 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLDN5O00501 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN5O00501 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLDN5O00501 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN5O00501 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN5O00501 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN5O00501 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN5O00501 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN5O00501 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN5O00501 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN5O00501 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN5O00501 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CLDN5O00501 BNIP3P1-202ENST00000550043 1585 ntBASIC17.02■□□□□ 0.32
CLDN5O00501 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CLDN5O00501 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN5O00501 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN5O00501 AC087499.5-201ENST00000452760 1342 ntBASIC17.02■□□□□ 0.32
CLDN5O00501 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN5O00501 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN5O00501 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN5O00501 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN5O00501 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN5O00501 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CLDN5O00501 TSPY16P-201ENST00000449843 468 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms