Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFKBIEO00221 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
NFKBIEO00221 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NFKBIEO00221 DEF8-202ENST00000418391 852 ntTSL 2 BASIC19.22■□□□□ 0.67
NFKBIEO00221 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC19.22■□□□□ 0.67
NFKBIEO00221 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.22■□□□□ 0.67
NFKBIEO00221 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.22■□□□□ 0.67
NFKBIEO00221 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC19.22■□□□□ 0.67
NFKBIEO00221 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.22■□□□□ 0.67
NFKBIEO00221 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.22■□□□□ 0.67
NFKBIEO00221 RNA5SP486-201ENST00000515961 83 ntBASIC19.22■□□□□ 0.67
NFKBIEO00221 AC015910.1-201ENST00000579400 975 ntBASIC19.22■□□□□ 0.67
NFKBIEO00221 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NFKBIEO00221 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFKBIEO00221 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFKBIEO00221 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NFKBIEO00221 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NFKBIEO00221 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NFKBIEO00221 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NFKBIEO00221 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NFKBIEO00221 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NFKBIEO00221 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFKBIEO00221 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFKBIEO00221 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFKBIEO00221 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.21■□□□□ 0.67
NFKBIEO00221 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFKBIEO00221 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFKBIEO00221 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFKBIEO00221 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFKBIEO00221 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFKBIEO00221 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.21■□□□□ 0.67
NFKBIEO00221 AC060834.1-201ENST00000443027 2032 ntBASIC19.21■□□□□ 0.67
NFKBIEO00221 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NFKBIEO00221 PHKG1P2-201ENST00000457537 863 ntBASIC19.21■□□□□ 0.67
NFKBIEO00221 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC19.21■□□□□ 0.67
NFKBIEO00221 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NFKBIEO00221 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFKBIEO00221 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.21■□□□□ 0.67
NFKBIEO00221 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC19.21■□□□□ 0.67
NFKBIEO00221 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.21■□□□□ 0.67
NFKBIEO00221 NKG7-204ENST00000595217 816 ntTSL 2 BASIC19.21■□□□□ 0.67
NFKBIEO00221 KLK3-207ENST00000595952 969 ntTSL 3 BASIC19.21■□□□□ 0.67
NFKBIEO00221 AP005019.2-201ENST00000615104 511 ntBASIC19.21■□□□□ 0.67
NFKBIEO00221 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
NFKBIEO00221 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFKBIEO00221 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFKBIEO00221 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NFKBIEO00221 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
NFKBIEO00221 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.2■□□□□ 0.66
NFKBIEO00221 AL592424.1-201ENST00000563624 1536 ntBASIC19.2■□□□□ 0.66
NFKBIEO00221 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.2■□□□□ 0.66
NFKBIEO00221 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKBIEO00221 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NFKBIEO00221 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKBIEO00221 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NFKBIEO00221 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKBIEO00221 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKBIEO00221 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKBIEO00221 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NFKBIEO00221 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NFKBIEO00221 IGF1-203ENST00000392904 761 ntTSL 5 BASIC19.2■□□□□ 0.66
NFKBIEO00221 CYP46A4P-201ENST00000414953 267 ntBASIC19.2■□□□□ 0.66
NFKBIEO00221 HSPB1P2-201ENST00000448722 546 ntBASIC19.2■□□□□ 0.66
NFKBIEO00221 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.2■□□□□ 0.66
NFKBIEO00221 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.2■□□□□ 0.66
NFKBIEO00221 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC19.2■□□□□ 0.66
NFKBIEO00221 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.2■□□□□ 0.66
NFKBIEO00221 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC19.2■□□□□ 0.66
NFKBIEO00221 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NFKBIEO00221 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.2■□□□□ 0.66
NFKBIEO00221 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKBIEO00221 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.2■□□□□ 0.66
NFKBIEO00221 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKBIEO00221 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKBIEO00221 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKBIEO00221 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
NFKBIEO00221 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NFKBIEO00221 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NFKBIEO00221 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFKBIEO00221 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFKBIEO00221 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NFKBIEO00221 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.19■□□□□ 0.66
NFKBIEO00221 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFKBIEO00221 MPV17-204ENST00000399052 749 ntTSL 4 BASIC19.19■□□□□ 0.66
NFKBIEO00221 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.19■□□□□ 0.66
NFKBIEO00221 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.19■□□□□ 0.66
NFKBIEO00221 AC016700.1-201ENST00000429424 312 ntBASIC19.19■□□□□ 0.66
NFKBIEO00221 POM121L10P-201ENST00000436994 1285 ntBASIC19.19■□□□□ 0.66
NFKBIEO00221 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.19■□□□□ 0.66
NFKBIEO00221 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.19■□□□□ 0.66
NFKBIEO00221 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC19.19■□□□□ 0.66
NFKBIEO00221 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.19■□□□□ 0.66
NFKBIEO00221 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.19■□□□□ 0.66
NFKBIEO00221 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.19■□□□□ 0.66
NFKBIEO00221 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFKBIEO00221 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NFKBIEO00221 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NFKBIEO00221 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.19■□□□□ 0.66
NFKBIEO00221 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NFKBIEO00221 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms