Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.4■□□□□ 0.22
TBC1D3BA6NDS4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
TBC1D3BA6NDS4 AL359881.2-201ENST00000602973 570 ntBASIC16.4■□□□□ 0.22
TBC1D3BA6NDS4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3BA6NDS4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3BA6NDS4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.4■□□□□ 0.22
TBC1D3BA6NDS4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3BA6NDS4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TBC1D3BA6NDS4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.4■□□□□ 0.22
TBC1D3BA6NDS4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TBC1D3BA6NDS4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3BA6NDS4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3BA6NDS4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3BA6NDS4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TBC1D3BA6NDS4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3BA6NDS4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
TBC1D3BA6NDS4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 AL512384.1-201ENST00000406683 331 ntBASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 AC074044.1-201ENST00000609673 707 ntBASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TBC1D3BA6NDS4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 LTB4R2-202ENST00000528054 3092 ntBASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 AC123567.1-201ENST00000548294 1261 ntBASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 WASH4P-201ENST00000564273 1246 ntBASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TBC1D3BA6NDS4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms