Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 LINC02447-202ENST00000501888 2146 ntBASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 SPDYE14P-201ENST00000442619 822 ntBASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 AC084121.4-201ENST00000641598 221 ntBASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 AF228730.8-201ENST00000642140 221 ntBASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPDC1A2A3K4 AC069224.1-201ENST00000566372 1715 ntBASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 MIR648-201ENST00000385046 94 ntBASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 MIR3197-201ENST00000582241 73 ntBASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 AC008677.1-201ENST00000519230 1561 ntBASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PTPDC1A2A3K4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.04■□□□□ 0.64
PTPDC1A2A3K4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PTPDC1A2A3K4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.04■□□□□ 0.64
PTPDC1A2A3K4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPDC1A2A3K4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPDC1A2A3K4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPDC1A2A3K4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPDC1A2A3K4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.04■□□□□ 0.64
PTPDC1A2A3K4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPDC1A2A3K4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPDC1A2A3K4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.04■□□□□ 0.64
PTPDC1A2A3K4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPDC1A2A3K4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPDC1A2A3K4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.04■□□□□ 0.64
PTPDC1A2A3K4 KLF2P3-201ENST00000451977 1087 ntBASIC19.04■□□□□ 0.64
PTPDC1A2A3K4 AC125807.1-201ENST00000483097 614 ntBASIC19.04■□□□□ 0.64
PTPDC1A2A3K4 ALG1L8P-201ENST00000533887 760 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms