Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 C18orf15-201ENST00000623680 2534 ntBASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 AC007064.4-201ENST00000637740 555 ntBASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-3A0A0A0MS03 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 AC073389.1-201ENST00000595595 795 ntBASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
TRBV5-3A0A0A0MS03 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 TCAF2P1-201ENST00000291129 2421 ntBASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.13■□□□□ 0.01
TRBV5-3A0A0A0MS03 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms