Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 BANP-204ENST00000393208 2283 ntTSL 2 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 AL591424.1-201ENST00000442569 1213 ntBASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 SLC25A1P1-201ENST00000528351 927 ntBASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 AL009183.1-201ENST00000603760 355 ntBASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 FRMD6-AS1-201ENST00000617151 2229 ntBASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 MIR940-201ENST00000401276 94 ntBASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 KRT18P3-201ENST00000451602 1288 ntBASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 AC140113.2-201ENST00000604370 208 ntBASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 AC068137.2-201ENST00000605408 478 ntBASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC11.82□□□□□ -0.52
TRGV1A0A0A0MS02 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms