Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.65■□□□□ 0.74
PCGF1Q9BSM1 AC010501.1-201ENST00000606270 1962 ntBASIC19.64■□□□□ 0.74
PCGF1Q9BSM1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.64■□□□□ 0.73
PCGF1Q9BSM1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCGF1Q9BSM1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.64■□□□□ 0.73
PCGF1Q9BSM1 AC103834.1-201ENST00000520383 144 ntBASIC19.64■□□□□ 0.73
PCGF1Q9BSM1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PCGF1Q9BSM1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCGF1Q9BSM1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCGF1Q9BSM1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCGF1Q9BSM1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.63■□□□□ 0.73
PCGF1Q9BSM1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCGF1Q9BSM1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCGF1Q9BSM1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCGF1Q9BSM1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.63■□□□□ 0.73
PCGF1Q9BSM1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCGF1Q9BSM1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCGF1Q9BSM1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.63■□□□□ 0.73
PCGF1Q9BSM1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PCGF1Q9BSM1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.63■□□□□ 0.73
PCGF1Q9BSM1 AC020928.2-201ENST00000588717 2197 ntBASIC19.63■□□□□ 0.73
PCGF1Q9BSM1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCGF1Q9BSM1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCGF1Q9BSM1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCGF1Q9BSM1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCGF1Q9BSM1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PCGF1Q9BSM1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCGF1Q9BSM1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCGF1Q9BSM1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.62■□□□□ 0.73
PCGF1Q9BSM1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCGF1Q9BSM1 LONRF2P2-201ENST00000439212 571 ntBASIC19.62■□□□□ 0.73
PCGF1Q9BSM1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.62■□□□□ 0.73
PCGF1Q9BSM1 MIR4508-201ENST00000584178 70 ntBASIC19.62■□□□□ 0.73
PCGF1Q9BSM1 AL451085.2-201ENST00000605085 799 ntBASIC19.62■□□□□ 0.73
PCGF1Q9BSM1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCGF1Q9BSM1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCGF1Q9BSM1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCGF1Q9BSM1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCGF1Q9BSM1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PCGF1Q9BSM1 AC019171.1-201ENST00000601251 1056 ntBASIC19.61■□□□□ 0.73
PCGF1Q9BSM1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCGF1Q9BSM1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCGF1Q9BSM1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCGF1Q9BSM1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.61■□□□□ 0.73
PCGF1Q9BSM1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCGF1Q9BSM1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCGF1Q9BSM1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCGF1Q9BSM1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.61■□□□□ 0.73
PCGF1Q9BSM1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCGF1Q9BSM1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCGF1Q9BSM1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCGF1Q9BSM1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCGF1Q9BSM1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.6■□□□□ 0.73
PCGF1Q9BSM1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCGF1Q9BSM1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PCGF1Q9BSM1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCGF1Q9BSM1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
PCGF1Q9BSM1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCGF1Q9BSM1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PCGF1Q9BSM1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.59■□□□□ 0.73
PCGF1Q9BSM1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCGF1Q9BSM1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCGF1Q9BSM1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.59■□□□□ 0.73
PCGF1Q9BSM1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCGF1Q9BSM1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.59■□□□□ 0.73
PCGF1Q9BSM1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.58■□□□□ 0.72
PCGF1Q9BSM1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCGF1Q9BSM1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCGF1Q9BSM1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCGF1Q9BSM1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.57■□□□□ 0.72
PCGF1Q9BSM1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCGF1Q9BSM1 AC103724.3-201ENST00000564481 992 ntBASIC19.57■□□□□ 0.72
PCGF1Q9BSM1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCGF1Q9BSM1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCGF1Q9BSM1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCGF1Q9BSM1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCGF1Q9BSM1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PCGF1Q9BSM1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCGF1Q9BSM1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCGF1Q9BSM1 AL031848.2-201ENST00000607670 837 ntBASIC19.56■□□□□ 0.72
PCGF1Q9BSM1 AL035685.1-201ENST00000636663 812 ntBASIC19.56■□□□□ 0.72
PCGF1Q9BSM1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PCGF1Q9BSM1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.55■□□□□ 0.72
PCGF1Q9BSM1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PCGF1Q9BSM1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.55■□□□□ 0.72
PCGF1Q9BSM1 ERN1-208ENST00000606895 2068 ntBASIC19.55■□□□□ 0.72
PCGF1Q9BSM1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCGF1Q9BSM1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCGF1Q9BSM1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.55■□□□□ 0.72
PCGF1Q9BSM1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCGF1Q9BSM1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.55■□□□□ 0.72
PCGF1Q9BSM1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.54■□□□□ 0.72
PCGF1Q9BSM1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCGF1Q9BSM1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCGF1Q9BSM1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
PCGF1Q9BSM1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCGF1Q9BSM1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCGF1Q9BSM1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PCGF1Q9BSM1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.54■□□□□ 0.72
PCGF1Q9BSM1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms