Protein–RNA interactions for Protein: Q96JP9

CDHR1, Cadherin-related family member 1, humanhuman

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1Q96JP9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.69■■□□□ 1.86
CDHR1Q96JP9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.68■■□□□ 1.86
CDHR1Q96JP9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
CDHR1Q96JP9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDHR1Q96JP9 MIR4281-201ENST00000580852 62 ntBASIC26.68■■□□□ 1.86
CDHR1Q96JP9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDHR1Q96JP9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDHR1Q96JP9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDHR1Q96JP9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CDHR1Q96JP9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDHR1Q96JP9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDHR1Q96JP9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDHR1Q96JP9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDHR1Q96JP9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CDHR1Q96JP9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.66■■□□□ 1.86
CDHR1Q96JP9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDHR1Q96JP9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
CDHR1Q96JP9 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.66■■□□□ 1.86
CDHR1Q96JP9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDHR1Q96JP9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.66■■□□□ 1.86
CDHR1Q96JP9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CDHR1Q96JP9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.65■■□□□ 1.86
CDHR1Q96JP9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDHR1Q96JP9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.65■■□□□ 1.86
CDHR1Q96JP9 MIR4787-201ENST00000607364 84 ntBASIC26.65■■□□□ 1.86
CDHR1Q96JP9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CDHR1Q96JP9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.64■■□□□ 1.86
CDHR1Q96JP9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.64■■□□□ 1.86
CDHR1Q96JP9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CDHR1Q96JP9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CDHR1Q96JP9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.64■■□□□ 1.86
CDHR1Q96JP9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.64■■□□□ 1.86
CDHR1Q96JP9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDHR1Q96JP9 AC021242.3-201ENST00000607598 1377 ntBASIC26.63■■□□□ 1.85
CDHR1Q96JP9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDHR1Q96JP9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDHR1Q96JP9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDHR1Q96JP9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDHR1Q96JP9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDHR1Q96JP9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDHR1Q96JP9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDHR1Q96JP9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDHR1Q96JP9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
CDHR1Q96JP9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDHR1Q96JP9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CDHR1Q96JP9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CDHR1Q96JP9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CDHR1Q96JP9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.61■■□□□ 1.85
CDHR1Q96JP9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.61■■□□□ 1.85
CDHR1Q96JP9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.61■■□□□ 1.85
CDHR1Q96JP9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CDHR1Q96JP9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.61■■□□□ 1.85
CDHR1Q96JP9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.61■■□□□ 1.85
CDHR1Q96JP9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CDHR1Q96JP9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CDHR1Q96JP9 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CDHR1Q96JP9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CDHR1Q96JP9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.6■■□□□ 1.85
CDHR1Q96JP9 DUSP8P4-201ENST00000399538 1761 ntBASIC26.6■■□□□ 1.85
CDHR1Q96JP9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.6■■□□□ 1.85
CDHR1Q96JP9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.6■■□□□ 1.85
CDHR1Q96JP9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
CDHR1Q96JP9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.59■■□□□ 1.85
CDHR1Q96JP9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CDHR1Q96JP9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.59■■□□□ 1.85
CDHR1Q96JP9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDHR1Q96JP9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CDHR1Q96JP9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.59■■□□□ 1.85
CDHR1Q96JP9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CDHR1Q96JP9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
CDHR1Q96JP9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.59■■□□□ 1.85
CDHR1Q96JP9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.59■■□□□ 1.85
CDHR1Q96JP9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
CDHR1Q96JP9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDHR1Q96JP9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
CDHR1Q96JP9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CDHR1Q96JP9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CDHR1Q96JP9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.58■■□□□ 1.85
CDHR1Q96JP9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.57■■□□□ 1.84
CDHR1Q96JP9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
CDHR1Q96JP9 AL356441.2-201ENST00000443009 864 ntBASIC26.57■■□□□ 1.84
CDHR1Q96JP9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.57■■□□□ 1.84
CDHR1Q96JP9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDHR1Q96JP9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
CDHR1Q96JP9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.56■■□□□ 1.84
CDHR1Q96JP9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDHR1Q96JP9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.56■■□□□ 1.84
CDHR1Q96JP9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDHR1Q96JP9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
CDHR1Q96JP9 AC090877.2-201ENST00000558441 1738 ntBASIC26.56■■□□□ 1.84
CDHR1Q96JP9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CDHR1Q96JP9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDHR1Q96JP9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CDHR1Q96JP9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.55■■□□□ 1.84
CDHR1Q96JP9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.55■■□□□ 1.84
CDHR1Q96JP9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.55■■□□□ 1.84
CDHR1Q96JP9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.55■■□□□ 1.84
CDHR1Q96JP9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
CDHR1Q96JP9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.55■■□□□ 1.84
CDHR1Q96JP9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms