Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.2■■□□□ 1.62
PRUNE2Q8WUY3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
PRUNE2Q8WUY3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.2■■□□□ 1.62
PRUNE2Q8WUY3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
PRUNE2Q8WUY3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.19■■□□□ 1.62
PRUNE2Q8WUY3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PRUNE2Q8WUY3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
PRUNE2Q8WUY3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.19■■□□□ 1.62
PRUNE2Q8WUY3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PRUNE2Q8WUY3 RASA4CP-201ENST00000424092 1398 ntBASIC25.18■■□□□ 1.62
PRUNE2Q8WUY3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PRUNE2Q8WUY3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
PRUNE2Q8WUY3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PRUNE2Q8WUY3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
PRUNE2Q8WUY3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PRUNE2Q8WUY3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
PRUNE2Q8WUY3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.17■■□□□ 1.62
PRUNE2Q8WUY3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PRUNE2Q8WUY3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.16■■□□□ 1.62
PRUNE2Q8WUY3 AC034268.1-201ENST00000441047 882 ntBASIC25.16■■□□□ 1.62
PRUNE2Q8WUY3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PRUNE2Q8WUY3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
PRUNE2Q8WUY3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PRUNE2Q8WUY3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PRUNE2Q8WUY3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.16■■□□□ 1.62
PRUNE2Q8WUY3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.16■■□□□ 1.62
PRUNE2Q8WUY3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.16■■□□□ 1.62
PRUNE2Q8WUY3 ABHD17AP1-201ENST00000358206 933 ntBASIC25.16■■□□□ 1.62
PRUNE2Q8WUY3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
PRUNE2Q8WUY3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PRUNE2Q8WUY3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
PRUNE2Q8WUY3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PRUNE2Q8WUY3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.15■■□□□ 1.62
PRUNE2Q8WUY3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
PRUNE2Q8WUY3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.14■■□□□ 1.62
PRUNE2Q8WUY3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC25.14■■□□□ 1.61
PRUNE2Q8WUY3 SLC47A1P1-202ENST00000449666 945 ntBASIC25.14■■□□□ 1.61
PRUNE2Q8WUY3 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.13■■□□□ 1.61
PRUNE2Q8WUY3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.13■■□□□ 1.61
PRUNE2Q8WUY3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PRUNE2Q8WUY3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
PRUNE2Q8WUY3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PRUNE2Q8WUY3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PRUNE2Q8WUY3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.13■■□□□ 1.61
PRUNE2Q8WUY3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
PRUNE2Q8WUY3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PRUNE2Q8WUY3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.12■■□□□ 1.61
PRUNE2Q8WUY3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.12■■□□□ 1.61
PRUNE2Q8WUY3 HLA-L-209ENST00000420110 1011 ntBASIC25.11■■□□□ 1.61
PRUNE2Q8WUY3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PRUNE2Q8WUY3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.11■■□□□ 1.61
PRUNE2Q8WUY3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
PRUNE2Q8WUY3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.11■■□□□ 1.61
PRUNE2Q8WUY3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PRUNE2Q8WUY3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PRUNE2Q8WUY3 BX255925.1-201ENST00000566954 1854 ntBASIC25.11■■□□□ 1.61
PRUNE2Q8WUY3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PRUNE2Q8WUY3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.11■■□□□ 1.61
PRUNE2Q8WUY3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.11■■□□□ 1.61
PRUNE2Q8WUY3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
PRUNE2Q8WUY3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
PRUNE2Q8WUY3 AL137784.2-201ENST00000607332 1000 ntBASIC25.1■■□□□ 1.61
PRUNE2Q8WUY3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.09■■□□□ 1.61
PRUNE2Q8WUY3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.09■■□□□ 1.61
PRUNE2Q8WUY3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.09■■□□□ 1.61
PRUNE2Q8WUY3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PRUNE2Q8WUY3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PRUNE2Q8WUY3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.09■■□□□ 1.61
PRUNE2Q8WUY3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PRUNE2Q8WUY3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PRUNE2Q8WUY3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PRUNE2Q8WUY3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
PRUNE2Q8WUY3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
PRUNE2Q8WUY3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PRUNE2Q8WUY3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.08■■□□□ 1.61
PRUNE2Q8WUY3 AP002414.2-202ENST00000590929 1450 ntBASIC25.08■■□□□ 1.61
PRUNE2Q8WUY3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
PRUNE2Q8WUY3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
PRUNE2Q8WUY3 AC011551.1-201ENST00000614101 683 ntBASIC25.07■■□□□ 1.6
PRUNE2Q8WUY3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PRUNE2Q8WUY3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PRUNE2Q8WUY3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PRUNE2Q8WUY3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PRUNE2Q8WUY3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PRUNE2Q8WUY3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
PRUNE2Q8WUY3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PRUNE2Q8WUY3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
PRUNE2Q8WUY3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PRUNE2Q8WUY3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.05■■□□□ 1.6
PRUNE2Q8WUY3 SRD5A1P1-201ENST00000442297 786 ntBASIC25.05■■□□□ 1.6
PRUNE2Q8WUY3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PRUNE2Q8WUY3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PRUNE2Q8WUY3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
PRUNE2Q8WUY3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
PRUNE2Q8WUY3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.04■■□□□ 1.6
PRUNE2Q8WUY3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.04■■□□□ 1.6
PRUNE2Q8WUY3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.04■■□□□ 1.6
PRUNE2Q8WUY3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.04■■□□□ 1.6
PRUNE2Q8WUY3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PRUNE2Q8WUY3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms