Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CPNE9Q8IYJ1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CPNE9Q8IYJ1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CPNE9Q8IYJ1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.3■■□□□ 1.32
CPNE9Q8IYJ1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.3■■□□□ 1.32
CPNE9Q8IYJ1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CPNE9Q8IYJ1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CPNE9Q8IYJ1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CPNE9Q8IYJ1 KRT18P10-201ENST00000388836 1287 ntBASIC23.29■■□□□ 1.32
CPNE9Q8IYJ1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CPNE9Q8IYJ1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.29■■□□□ 1.32
CPNE9Q8IYJ1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CPNE9Q8IYJ1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CPNE9Q8IYJ1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CPNE9Q8IYJ1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CPNE9Q8IYJ1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPNE9Q8IYJ1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CPNE9Q8IYJ1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPNE9Q8IYJ1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPNE9Q8IYJ1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CPNE9Q8IYJ1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.28■■□□□ 1.32
CPNE9Q8IYJ1 AC018755.3-202ENST00000596210 929 ntBASIC23.28■■□□□ 1.32
CPNE9Q8IYJ1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
CPNE9Q8IYJ1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.28■■□□□ 1.32
CPNE9Q8IYJ1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.28■■□□□ 1.32
CPNE9Q8IYJ1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPNE9Q8IYJ1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPNE9Q8IYJ1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CPNE9Q8IYJ1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPNE9Q8IYJ1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.27■■□□□ 1.32
CPNE9Q8IYJ1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
CPNE9Q8IYJ1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CPNE9Q8IYJ1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.27■■□□□ 1.32
CPNE9Q8IYJ1 DUX4L9-201ENST00000449051 1259 ntBASIC23.27■■□□□ 1.32
CPNE9Q8IYJ1 ABHD17AP5-201ENST00000580133 923 ntBASIC23.27■■□□□ 1.32
CPNE9Q8IYJ1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPNE9Q8IYJ1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPNE9Q8IYJ1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPNE9Q8IYJ1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPNE9Q8IYJ1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CPNE9Q8IYJ1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CPNE9Q8IYJ1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CPNE9Q8IYJ1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.26■■□□□ 1.31
CPNE9Q8IYJ1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.26■■□□□ 1.31
CPNE9Q8IYJ1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CPNE9Q8IYJ1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CPNE9Q8IYJ1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.26■■□□□ 1.31
CPNE9Q8IYJ1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPNE9Q8IYJ1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CPNE9Q8IYJ1 KRT18P60-201ENST00000312876 1297 ntBASIC23.25■■□□□ 1.31
CPNE9Q8IYJ1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.25■■□□□ 1.31
CPNE9Q8IYJ1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.25■■□□□ 1.31
CPNE9Q8IYJ1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPNE9Q8IYJ1 AC093323.1-202ENST00000635031 2045 ntBASIC23.25■■□□□ 1.31
CPNE9Q8IYJ1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.24■■□□□ 1.31
CPNE9Q8IYJ1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CPNE9Q8IYJ1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CPNE9Q8IYJ1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.24■■□□□ 1.31
CPNE9Q8IYJ1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CPNE9Q8IYJ1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.23■■□□□ 1.31
CPNE9Q8IYJ1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.23■■□□□ 1.31
CPNE9Q8IYJ1 MIR6765-201ENST00000614092 87 ntBASIC23.23■■□□□ 1.31
CPNE9Q8IYJ1 AC129492.7-201ENST00000622992 756 ntBASIC23.23■■□□□ 1.31
CPNE9Q8IYJ1 AL139125.2-201ENST00000623134 1869 ntBASIC23.22■■□□□ 1.31
CPNE9Q8IYJ1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CPNE9Q8IYJ1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CPNE9Q8IYJ1 RPS2P7-201ENST00000447334 885 ntBASIC23.22■■□□□ 1.31
CPNE9Q8IYJ1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.22■■□□□ 1.31
CPNE9Q8IYJ1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CPNE9Q8IYJ1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CPNE9Q8IYJ1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.22■■□□□ 1.31
CPNE9Q8IYJ1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
CPNE9Q8IYJ1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
CPNE9Q8IYJ1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CPNE9Q8IYJ1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CPNE9Q8IYJ1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CPNE9Q8IYJ1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CPNE9Q8IYJ1 AP003733.4-201ENST00000623785 1697 ntBASIC23.21■■□□□ 1.31
CPNE9Q8IYJ1 FOXO3B-201ENST00000395675 1928 ntBASIC23.21■■□□□ 1.31
CPNE9Q8IYJ1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
CPNE9Q8IYJ1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPNE9Q8IYJ1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPNE9Q8IYJ1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CPNE9Q8IYJ1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CPNE9Q8IYJ1 NTF6A-201ENST00000591175 560 ntBASIC23.2■■□□□ 1.3
CPNE9Q8IYJ1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.19■■□□□ 1.3
CPNE9Q8IYJ1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CPNE9Q8IYJ1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPNE9Q8IYJ1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPNE9Q8IYJ1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CPNE9Q8IYJ1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.18■■□□□ 1.3
CPNE9Q8IYJ1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CPNE9Q8IYJ1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPNE9Q8IYJ1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CPNE9Q8IYJ1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.17■■□□□ 1.3
CPNE9Q8IYJ1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.17■■□□□ 1.3
CPNE9Q8IYJ1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPNE9Q8IYJ1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.17■■□□□ 1.3
CPNE9Q8IYJ1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPNE9Q8IYJ1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms