Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
LYSMD3Q7Z3D4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
LYSMD3Q7Z3D4 PVT1_1.1-201ENST00000615125 194 ntBASIC23.74■■□□□ 1.39
LYSMD3Q7Z3D4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
LYSMD3Q7Z3D4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LYSMD3Q7Z3D4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LYSMD3Q7Z3D4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.73■■□□□ 1.39
LYSMD3Q7Z3D4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LYSMD3Q7Z3D4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
LYSMD3Q7Z3D4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LYSMD3Q7Z3D4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.73■■□□□ 1.39
LYSMD3Q7Z3D4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.72■■□□□ 1.39
LYSMD3Q7Z3D4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LYSMD3Q7Z3D4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LYSMD3Q7Z3D4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
LYSMD3Q7Z3D4 AC074183.2-201ENST00000623112 922 ntBASIC23.72■■□□□ 1.39
LYSMD3Q7Z3D4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.72■■□□□ 1.39
LYSMD3Q7Z3D4 AC020928.2-201ENST00000588717 2197 ntBASIC23.72■■□□□ 1.39
LYSMD3Q7Z3D4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LYSMD3Q7Z3D4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.71■■□□□ 1.39
LYSMD3Q7Z3D4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.71■■□□□ 1.39
LYSMD3Q7Z3D4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
LYSMD3Q7Z3D4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
LYSMD3Q7Z3D4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.71■■□□□ 1.39
LYSMD3Q7Z3D4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.71■■□□□ 1.39
LYSMD3Q7Z3D4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LYSMD3Q7Z3D4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.71■■□□□ 1.39
LYSMD3Q7Z3D4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LYSMD3Q7Z3D4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LYSMD3Q7Z3D4 SLC6A10P-202ENST00000431994 2058 ntBASIC23.7■■□□□ 1.38
LYSMD3Q7Z3D4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
LYSMD3Q7Z3D4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LYSMD3Q7Z3D4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LYSMD3Q7Z3D4 FOXO3B-201ENST00000395675 1928 ntBASIC23.69■■□□□ 1.38
LYSMD3Q7Z3D4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LYSMD3Q7Z3D4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.69■■□□□ 1.38
LYSMD3Q7Z3D4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
LYSMD3Q7Z3D4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LYSMD3Q7Z3D4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LYSMD3Q7Z3D4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
LYSMD3Q7Z3D4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.68■■□□□ 1.38
LYSMD3Q7Z3D4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LYSMD3Q7Z3D4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
LYSMD3Q7Z3D4 AC019171.1-201ENST00000601251 1056 ntBASIC23.68■■□□□ 1.38
LYSMD3Q7Z3D4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LYSMD3Q7Z3D4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
LYSMD3Q7Z3D4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LYSMD3Q7Z3D4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.67■■□□□ 1.38
LYSMD3Q7Z3D4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LYSMD3Q7Z3D4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
LYSMD3Q7Z3D4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.67■■□□□ 1.38
LYSMD3Q7Z3D4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LYSMD3Q7Z3D4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LYSMD3Q7Z3D4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LYSMD3Q7Z3D4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LYSMD3Q7Z3D4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.66■■□□□ 1.38
LYSMD3Q7Z3D4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.66■■□□□ 1.38
LYSMD3Q7Z3D4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LYSMD3Q7Z3D4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LYSMD3Q7Z3D4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
LYSMD3Q7Z3D4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
LYSMD3Q7Z3D4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LYSMD3Q7Z3D4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.65■■□□□ 1.38
LYSMD3Q7Z3D4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.65■■□□□ 1.38
LYSMD3Q7Z3D4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
LYSMD3Q7Z3D4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LYSMD3Q7Z3D4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LYSMD3Q7Z3D4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
LYSMD3Q7Z3D4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LYSMD3Q7Z3D4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.64■■□□□ 1.38
LYSMD3Q7Z3D4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.64■■□□□ 1.38
LYSMD3Q7Z3D4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LYSMD3Q7Z3D4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.64■■□□□ 1.37
LYSMD3Q7Z3D4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LYSMD3Q7Z3D4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.64■■□□□ 1.37
LYSMD3Q7Z3D4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
LYSMD3Q7Z3D4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.64■■□□□ 1.37
LYSMD3Q7Z3D4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LYSMD3Q7Z3D4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LYSMD3Q7Z3D4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
LYSMD3Q7Z3D4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.63■■□□□ 1.37
LYSMD3Q7Z3D4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.63■■□□□ 1.37
LYSMD3Q7Z3D4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LYSMD3Q7Z3D4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
LYSMD3Q7Z3D4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LYSMD3Q7Z3D4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LYSMD3Q7Z3D4 KRT8P33-201ENST00000508125 1423 ntBASIC23.62■■□□□ 1.37
LYSMD3Q7Z3D4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LYSMD3Q7Z3D4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
LYSMD3Q7Z3D4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.62■■□□□ 1.37
LYSMD3Q7Z3D4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LYSMD3Q7Z3D4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
LYSMD3Q7Z3D4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LYSMD3Q7Z3D4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
LYSMD3Q7Z3D4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LYSMD3Q7Z3D4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LYSMD3Q7Z3D4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LYSMD3Q7Z3D4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
LYSMD3Q7Z3D4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LYSMD3Q7Z3D4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms