Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 CBC2YPL178W 627 nt6.87□□□□□ -1.31
RTR1P40084 MTC5YDR128W 3447 nt6.87□□□□□ -1.31
RTR1P40084 YCR061WYCR061W 1896 nt6.87□□□□□ -1.31
RTR1P40084 TAX4YJL083W 1815 nt6.86□□□□□ -1.31
RTR1P40084 KNH1YDL049C 807 nt6.86□□□□□ -1.31
RTR1P40084 MLC1YGL106W 450 nt6.86□□□□□ -1.31
RTR1P40084 SIP2YGL208W 1248 nt6.86□□□□□ -1.31
RTR1P40084 CAR1YPL111W 1002 nt6.86□□□□□ -1.31
RTR1P40084 RRT2YBR246W 1164 nt6.86□□□□□ -1.31
RTR1P40084 RMD9YGL107C 1941 nt6.86□□□□□ -1.31
RTR1P40084 TOS4YLR183C 1470 nt6.85□□□□□ -1.31
RTR1P40084 TEA1YOR337W 2280 nt6.85□□□□□ -1.31
RTR1P40084 UTP18YJL069C 1785 nt6.85□□□□□ -1.31
RTR1P40084 YDR541CYDR541C 1035 nt6.85□□□□□ -1.31
RTR1P40084 YKL151CYKL151C 1014 nt6.85□□□□□ -1.31
RTR1P40084 HAS1YMR290C 1518 nt6.85□□□□□ -1.31
RTR1P40084 PTK2YJR059W 2457 nt6.84□□□□□ -1.31
RTR1P40084 RPT6YGL048C 1218 nt6.84□□□□□ -1.31
RTR1P40084 AMA1YGR225W 1782 nt6.84□□□□□ -1.31
RTR1P40084 YHR127WYHR127W 732 nt6.83□□□□□ -1.32
RTR1P40084 YBL044WYBL044W 369 nt6.83□□□□□ -1.32
RTR1P40084 KTR3YBR205W 1215 nt6.83□□□□□ -1.32
RTR1P40084 SEC12YNR026C 1416 nt6.83□□□□□ -1.32
RTR1P40084 PPR1YLR014C 2715 nt6.83□□□□□ -1.32
RTR1P40084 NMD5YJR132W 3147 nt6.82□□□□□ -1.32
RTR1P40084 TDH3YGR192C 999 nt6.82□□□□□ -1.32
RTR1P40084 DAL3YIR032C 588 nt6.82□□□□□ -1.32
RTR1P40084 RHO2YNL090W 579 nt6.82□□□□□ -1.32
RTR1P40084 PHO8YDR481C 1701 nt6.81□□□□□ -1.32
RTR1P40084 SLO1YER180C-A 258 nt6.81□□□□□ -1.32
RTR1P40084 YPR098CYPR098C 486 nt6.81□□□□□ -1.32
RTR1P40084 PRO3YER023W 861 nt6.8□□□□□ -1.32
RTR1P40084 YIL060WYIL060W 435 nt6.8□□□□□ -1.32
RTR1P40084 YOR318CYOR318C 306 nt6.8□□□□□ -1.32
RTR1P40084 SCT1YBL011W 2280 nt6.8□□□□□ -1.32
RTR1P40084 RSA4YCR072C 1548 nt6.8□□□□□ -1.32
RTR1P40084 ASH1YKL185W 1767 nt6.8□□□□□ -1.32
RTR1P40084 MMP1YLL061W 1752 nt6.79□□□□□ -1.32
RTR1P40084 HRP1YOL123W 1605 nt6.79□□□□□ -1.32
RTR1P40084 YFL034WYFL034W 3222 nt6.78□□□□□ -1.32
RTR1P40084 YGL194C-AYGL194C-A 243 nt6.78□□□□□ -1.32
RTR1P40084 YGR182CYGR182C 354 nt6.78□□□□□ -1.32
RTR1P40084 SCW4YGR279C 1161 nt6.78□□□□□ -1.32
RTR1P40084 HXT3YDR345C 1704 nt6.78□□□□□ -1.32
RTR1P40084 SNT2YGL131C 4212 nt6.77□□□□□ -1.32
RTR1P40084 SGV1YPR161C 1974 nt6.77□□□□□ -1.33
RTR1P40084 PGA2YNL149C 390 nt6.77□□□□□ -1.33
RTR1P40084 ROX3YBL093C 663 nt6.77□□□□□ -1.33
RTR1P40084 ICE2YIL090W 1476 nt6.77□□□□□ -1.33
RTR1P40084 ALD6YPL061W 1503 nt6.76□□□□□ -1.33
RTR1P40084 TRP5YGL026C 2124 nt6.76□□□□□ -1.33
RTR1P40084 NOB1YOR056C 1380 nt6.76□□□□□ -1.33
RTR1P40084 HFI1YPL254W 1467 nt6.76□□□□□ -1.33
RTR1P40084 PDH1YPR002W 1551 nt6.76□□□□□ -1.33
RTR1P40084 TBF1YPL128C 1689 nt6.76□□□□□ -1.33
RTR1P40084 HXT2YMR011W 1626 nt6.76□□□□□ -1.33
RTR1P40084 RET1YOR207C 3450 nt6.75□□□□□ -1.33
RTR1P40084 YFL064CYFL064C 525 nt6.75□□□□□ -1.33
RTR1P40084 VMA16YHR026W 642 nt6.75□□□□□ -1.33
RTR1P40084 MND2YIR025W 1107 nt6.75□□□□□ -1.33
RTR1P40084 YOR300WYOR300W 309 nt6.75□□□□□ -1.33
RTR1P40084 YPR202WYPR202W 717 nt6.75□□□□□ -1.33
RTR1P40084 QRI1YDL103C 1434 nt6.75□□□□□ -1.33
RTR1P40084 SOG2YOR353C 2376 nt6.74□□□□□ -1.33
RTR1P40084 GAA1YLR088W 1845 nt6.74□□□□□ -1.33
RTR1P40084 ULA1YPL003W 1389 nt6.74□□□□□ -1.33
RTR1P40084 PRP2YNR011C 2631 nt6.74□□□□□ -1.33
RTR1P40084 YKR023WYKR023W 1593 nt6.74□□□□□ -1.33
RTR1P40084 GET3YDL100C 1065 nt6.73□□□□□ -1.33
RTR1P40084 HEM3YDL205C 984 nt6.73□□□□□ -1.33
RTR1P40084 YJL068CYJL068C 900 nt6.73□□□□□ -1.33
RTR1P40084 RER2YBR002C 861 nt6.73□□□□□ -1.33
RTR1P40084 SAM4YPL273W 978 nt6.73□□□□□ -1.33
RTR1P40084 DPH2YKL191W 1605 nt6.72□□□□□ -1.33
RTR1P40084 YCL041CYCL041C 495 nt6.72□□□□□ -1.33
RTR1P40084 GPA1YHR005C 1419 nt6.72□□□□□ -1.33
RTR1P40084 YGL036WYGL036W 2730 nt6.72□□□□□ -1.33
RTR1P40084 ACS1YAL054C 2142 nt6.71□□□□□ -1.33
RTR1P40084 DFG5YMR238W 1377 nt6.71□□□□□ -1.33
RTR1P40084 ADE13YLR359W 1449 nt6.71□□□□□ -1.34
RTR1P40084 CDC43YGL155W 1131 nt6.71□□□□□ -1.34
RTR1P40084 SUA5YGL169W 1281 nt6.71□□□□□ -1.34
RTR1P40084 YMR155WYMR155W 1644 nt6.7□□□□□ -1.34
RTR1P40084 GAT4YIR013C 366 nt6.7□□□□□ -1.34
RTR1P40084 CBF1YJR060W 1056 nt6.7□□□□□ -1.34
RTR1P40084 POM33YLL023C 840 nt6.7□□□□□ -1.34
RTR1P40084 HOR7YMR251W-A 180 nt6.7□□□□□ -1.34
RTR1P40084 RPS19BYNL302C 435 nt6.7□□□□□ -1.34
RTR1P40084 ETR1YBR026C 1143 nt6.7□□□□□ -1.34
RTR1P40084 YJR015WYJR015W 1533 nt6.7□□□□□ -1.34
RTR1P40084 GLO2YDR272W 825 nt6.69□□□□□ -1.34
RTR1P40084 MHR1YDR296W 681 nt6.69□□□□□ -1.34
RTR1P40084 GPM3YOL056W 912 nt6.69□□□□□ -1.34
RTR1P40084 EPS1YIL005W 2106 nt6.68□□□□□ -1.34
RTR1P40084 QDR1YIL120W 1692 nt6.68□□□□□ -1.34
RTR1P40084 RAT1YOR048C 3021 nt6.68□□□□□ -1.34
RTR1P40084 YHC3YJL059W 1227 nt6.68□□□□□ -1.34
RTR1P40084 KTR5YNL029C 1569 nt6.68□□□□□ -1.34
RTR1P40084 SMF3YLR034C 1422 nt6.67□□□□□ -1.34
RTR1P40084 HGH1YGR187C 1185 nt6.67□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 23.8 ms