Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
APOBP04114 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
APOBP04114 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
APOBP04114 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
APOBP04114 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
APOBP04114 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.05■□□□□ 0
APOBP04114 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
APOBP04114 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ 0
APOBP04114 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.05■□□□□ 0
APOBP04114 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC15.05■□□□□ -0
APOBP04114 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
APOBP04114 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
APOBP04114 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
APOBP04114 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
APOBP04114 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
APOBP04114 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.04■□□□□ -0
APOBP04114 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.04■□□□□ -0
APOBP04114 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC15.04■□□□□ -0
APOBP04114 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.04■□□□□ -0
APOBP04114 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.04■□□□□ -0
APOBP04114 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.04■□□□□ -0
APOBP04114 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.04■□□□□ -0
APOBP04114 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.04■□□□□ -0
APOBP04114 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APOBP04114 ABCB10P1-201ENST00000614297 2181 ntBASIC15.04■□□□□ -0
APOBP04114 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.04■□□□□ -0
APOBP04114 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.04■□□□□ -0
APOBP04114 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
APOBP04114 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC15.03■□□□□ -0
APOBP04114 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
APOBP04114 AF213884.3-201ENST00000563833 479 ntBASIC15.03■□□□□ -0
APOBP04114 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
APOBP04114 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.03■□□□□ -0
APOBP04114 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
APOBP04114 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
APOBP04114 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
APOBP04114 AL136162.1-201ENST00000607711 1078 ntBASIC15.02□□□□□ -0.01
APOBP04114 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
APOBP04114 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
APOBP04114 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
APOBP04114 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.02□□□□□ -0.01
APOBP04114 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
APOBP04114 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.01□□□□□ -0.01
APOBP04114 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOBP04114 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOBP04114 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
APOBP04114 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
APOBP04114 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOBP04114 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOBP04114 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.01□□□□□ -0.01
APOBP04114 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOBP04114 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15□□□□□ -0.01
APOBP04114 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
APOBP04114 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOBP04114 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOBP04114 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
APOBP04114 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15□□□□□ -0.01
APOBP04114 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15□□□□□ -0.01
APOBP04114 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOBP04114 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15□□□□□ -0.01
APOBP04114 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
APOBP04114 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOBP04114 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC14.99□□□□□ -0.01
APOBP04114 PROC-203ENST00000409048 1586 ntTSL 5 BASIC14.99□□□□□ -0.01
APOBP04114 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
APOBP04114 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
APOBP04114 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOBP04114 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOBP04114 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOBP04114 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.99□□□□□ -0.01
APOBP04114 SNX5-217ENST00000606557 1087 ntBASIC14.99□□□□□ -0.01
APOBP04114 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOBP04114 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.99□□□□□ -0.01
APOBP04114 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
APOBP04114 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
APOBP04114 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.98□□□□□ -0.01
APOBP04114 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOBP04114 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOBP04114 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC14.98□□□□□ -0.01
APOBP04114 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBP04114 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBP04114 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
APOBP04114 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC14.98□□□□□ -0.01
APOBP04114 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBP04114 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
APOBP04114 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBP04114 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOBP04114 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOBP04114 EDA-201ENST00000338901 1233 ntBASIC14.97□□□□□ -0.01
APOBP04114 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.97□□□□□ -0.01
APOBP04114 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOBP04114 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOBP04114 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC14.97□□□□□ -0.01
APOBP04114 CA15P2-201ENST00000611168 834 ntBASIC14.97□□□□□ -0.01
APOBP04114 KRT18P10-201ENST00000388836 1287 ntBASIC14.97□□□□□ -0.01
APOBP04114 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOBP04114 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOBP04114 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOBP04114 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.96□□□□□ -0.01
APOBP04114 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms