Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND4P03905 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND4P03905 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND4P03905 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND4P03905 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
MT-ND4P03905 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND4P03905 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND4P03905 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND4P03905 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
MT-ND4P03905 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND4P03905 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND4P03905 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND4P03905 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
MT-ND4P03905 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MT-ND4P03905 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
MT-ND4P03905 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-ND4P03905 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-ND4P03905 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-ND4P03905 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.39■□□□□ 0.85
MT-ND4P03905 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
MT-ND4P03905 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-ND4P03905 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-ND4P03905 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-ND4P03905 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-ND4P03905 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-ND4P03905 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.39■□□□□ 0.85
MT-ND4P03905 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.39■□□□□ 0.85
MT-ND4P03905 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
MT-ND4P03905 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND4P03905 AL359258.2-201ENST00000564063 1566 ntBASIC20.38■□□□□ 0.85
MT-ND4P03905 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND4P03905 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND4P03905 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND4P03905 MIR3648-2-201ENST00000581792 180 ntBASIC20.38■□□□□ 0.85
MT-ND4P03905 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.38■□□□□ 0.85
MT-ND4P03905 MIR3648-1-201ENST00000615959 180 ntBASIC20.38■□□□□ 0.85
MT-ND4P03905 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.38■□□□□ 0.85
MT-ND4P03905 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.38■□□□□ 0.85
MT-ND4P03905 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND4P03905 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
MT-ND4P03905 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.38■□□□□ 0.85
MT-ND4P03905 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND4P03905 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.38■□□□□ 0.85
MT-ND4P03905 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND4P03905 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.37■□□□□ 0.85
MT-ND4P03905 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND4P03905 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND4P03905 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
MT-ND4P03905 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
MT-ND4P03905 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.37■□□□□ 0.85
MT-ND4P03905 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND4P03905 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
MT-ND4P03905 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
MT-ND4P03905 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND4P03905 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.37■□□□□ 0.85
MT-ND4P03905 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND4P03905 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND4P03905 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND4P03905 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND4P03905 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND4P03905 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND4P03905 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.36■□□□□ 0.85
MT-ND4P03905 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND4P03905 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND4P03905 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND4P03905 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.35■□□□□ 0.85
MT-ND4P03905 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MT-ND4P03905 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MT-ND4P03905 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
MT-ND4P03905 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.34■□□□□ 0.85
MT-ND4P03905 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND4P03905 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND4P03905 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND4P03905 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND4P03905 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND4P03905 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
MT-ND4P03905 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MT-ND4P03905 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.33■□□□□ 0.85
MT-ND4P03905 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MT-ND4P03905 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.33■□□□□ 0.85
MT-ND4P03905 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.33■□□□□ 0.84
MT-ND4P03905 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MT-ND4P03905 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MT-ND4P03905 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND4P03905 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.32■□□□□ 0.84
MT-ND4P03905 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND4P03905 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND4P03905 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND4P03905 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.32■□□□□ 0.84
MT-ND4P03905 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
MT-ND4P03905 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND4P03905 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND4P03905 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND4P03905 AL359504.2-201ENST00000605506 1601 ntBASIC20.31■□□□□ 0.84
MT-ND4P03905 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND4P03905 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND4P03905 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
MT-ND4P03905 AC016575.1-201ENST00000607026 382 ntBASIC20.31■□□□□ 0.84
MT-ND4P03905 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
MT-ND4P03905 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms