Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH8O95206 AC131212.1-201ENST00000613771 668 ntBASIC23.65■■□□□ 1.38
PCDH8O95206 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH8O95206 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH8O95206 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.64■■□□□ 1.37
PCDH8O95206 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDH8O95206 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.64■■□□□ 1.37
PCDH8O95206 FOXO3B-201ENST00000395675 1928 ntBASIC23.64■■□□□ 1.37
PCDH8O95206 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH8O95206 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH8O95206 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH8O95206 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH8O95206 AC092803.2-201ENST00000564287 1899 ntBASIC23.64■■□□□ 1.37
PCDH8O95206 AC097639.1-201ENST00000565519 1891 ntBASIC23.64■■□□□ 1.37
PCDH8O95206 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
PCDH8O95206 AC010501.1-201ENST00000606270 1962 ntBASIC23.63■■□□□ 1.37
PCDH8O95206 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PCDH8O95206 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.63■■□□□ 1.37
PCDH8O95206 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
PCDH8O95206 MIR4281-201ENST00000580852 62 ntBASIC23.63■■□□□ 1.37
PCDH8O95206 AC137630.3-201ENST00000607245 391 ntBASIC23.63■■□□□ 1.37
PCDH8O95206 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDH8O95206 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDH8O95206 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
PCDH8O95206 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH8O95206 AL356441.2-201ENST00000443009 864 ntBASIC23.62■■□□□ 1.37
PCDH8O95206 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
PCDH8O95206 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDH8O95206 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH8O95206 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH8O95206 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH8O95206 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH8O95206 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH8O95206 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
PCDH8O95206 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDH8O95206 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH8O95206 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PCDH8O95206 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.61■■□□□ 1.37
PCDH8O95206 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDH8O95206 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH8O95206 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDH8O95206 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH8O95206 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDH8O95206 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.6■■□□□ 1.37
PCDH8O95206 AC011551.1-201ENST00000614101 683 ntBASIC23.6■■□□□ 1.37
PCDH8O95206 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
PCDH8O95206 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDH8O95206 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH8O95206 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH8O95206 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH8O95206 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH8O95206 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH8O95206 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH8O95206 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDH8O95206 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.58■■□□□ 1.37
PCDH8O95206 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDH8O95206 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.58■■□□□ 1.37
PCDH8O95206 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH8O95206 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCDH8O95206 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
PCDH8O95206 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.57■■□□□ 1.36
PCDH8O95206 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH8O95206 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.57■■□□□ 1.36
PCDH8O95206 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH8O95206 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.57■■□□□ 1.36
PCDH8O95206 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH8O95206 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH8O95206 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.57■■□□□ 1.36
PCDH8O95206 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH8O95206 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH8O95206 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH8O95206 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH8O95206 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH8O95206 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH8O95206 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH8O95206 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH8O95206 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH8O95206 AC021242.3-201ENST00000607598 1377 ntBASIC23.55■■□□□ 1.36
PCDH8O95206 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH8O95206 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH8O95206 TSPY9P-201ENST00000440215 945 ntBASIC23.55■■□□□ 1.36
PCDH8O95206 TSPY11P-201ENST00000442607 1045 ntBASIC23.55■■□□□ 1.36
PCDH8O95206 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDH8O95206 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
PCDH8O95206 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDH8O95206 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH8O95206 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH8O95206 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH8O95206 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
PCDH8O95206 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH8O95206 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH8O95206 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH8O95206 UNC93B8-201ENST00000511903 705 ntBASIC23.53■■□□□ 1.36
PCDH8O95206 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDH8O95206 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDH8O95206 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH8O95206 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDH8O95206 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
PCDH8O95206 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH8O95206 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms