Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.04■□□□□ 0.96
UBL3O95164 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
UBL3O95164 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBL3O95164 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.04■□□□□ 0.96
UBL3O95164 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBL3O95164 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBL3O95164 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.04■□□□□ 0.96
UBL3O95164 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBL3O95164 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBL3O95164 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.03■□□□□ 0.96
UBL3O95164 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBL3O95164 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
UBL3O95164 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBL3O95164 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
UBL3O95164 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBL3O95164 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.02■□□□□ 0.96
UBL3O95164 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBL3O95164 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
UBL3O95164 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
UBL3O95164 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
UBL3O95164 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
UBL3O95164 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBL3O95164 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBL3O95164 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBL3O95164 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBL3O95164 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.01■□□□□ 0.95
UBL3O95164 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBL3O95164 KRT18P10-201ENST00000388836 1287 ntBASIC21.01■□□□□ 0.95
UBL3O95164 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBL3O95164 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
UBL3O95164 KRT18P60-201ENST00000312876 1297 ntBASIC21■□□□□ 0.95
UBL3O95164 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
UBL3O95164 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
UBL3O95164 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
UBL3O95164 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBL3O95164 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBL3O95164 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBL3O95164 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21■□□□□ 0.95
UBL3O95164 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBL3O95164 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBL3O95164 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBL3O95164 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBL3O95164 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBL3O95164 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBL3O95164 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
UBL3O95164 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBL3O95164 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBL3O95164 AC018755.3-202ENST00000596210 929 ntBASIC20.99■□□□□ 0.95
UBL3O95164 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBL3O95164 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBL3O95164 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
UBL3O95164 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBL3O95164 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBL3O95164 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.99■□□□□ 0.95
UBL3O95164 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBL3O95164 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
UBL3O95164 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBL3O95164 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
UBL3O95164 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.98■□□□□ 0.95
UBL3O95164 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.98■□□□□ 0.95
UBL3O95164 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
UBL3O95164 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
UBL3O95164 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBL3O95164 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.97■□□□□ 0.95
UBL3O95164 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBL3O95164 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.97■□□□□ 0.95
UBL3O95164 AC129492.7-201ENST00000622992 756 ntBASIC20.97■□□□□ 0.95
UBL3O95164 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBL3O95164 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.97■□□□□ 0.95
UBL3O95164 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBL3O95164 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBL3O95164 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.96■□□□□ 0.95
UBL3O95164 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBL3O95164 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBL3O95164 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBL3O95164 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBL3O95164 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.96■□□□□ 0.95
UBL3O95164 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBL3O95164 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBL3O95164 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBL3O95164 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
UBL3O95164 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
UBL3O95164 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.95■□□□□ 0.94
UBL3O95164 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBL3O95164 MIR6765-201ENST00000614092 87 ntBASIC20.95■□□□□ 0.94
UBL3O95164 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
UBL3O95164 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.95■□□□□ 0.94
UBL3O95164 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBL3O95164 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBL3O95164 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBL3O95164 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBL3O95164 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.94■□□□□ 0.94
UBL3O95164 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBL3O95164 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBL3O95164 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBL3O95164 DUX4L9-201ENST00000449051 1259 ntBASIC20.94■□□□□ 0.94
UBL3O95164 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.94■□□□□ 0.94
UBL3O95164 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
UBL3O95164 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBL3O95164 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms