Protein–RNA interactions for Protein: O75556

SCGB2A1, Mammaglobin-B, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A1O75556 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCGB2A1O75556 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCGB2A1O75556 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCGB2A1O75556 RP9P-202ENST00000450133 1212 ntBASIC18.54■□□□□ 0.56
SCGB2A1O75556 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.54■□□□□ 0.56
SCGB2A1O75556 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCGB2A1O75556 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.54■□□□□ 0.56
SCGB2A1O75556 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SCGB2A1O75556 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SCGB2A1O75556 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCGB2A1O75556 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCGB2A1O75556 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCGB2A1O75556 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.53■□□□□ 0.56
SCGB2A1O75556 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SCGB2A1O75556 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCGB2A1O75556 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCGB2A1O75556 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCGB2A1O75556 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCGB2A1O75556 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCGB2A1O75556 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCGB2A1O75556 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCGB2A1O75556 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCGB2A1O75556 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCGB2A1O75556 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.52■□□□□ 0.56
SCGB2A1O75556 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.52■□□□□ 0.56
SCGB2A1O75556 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCGB2A1O75556 AC022211.4-201ENST00000625094 2161 ntBASIC18.52■□□□□ 0.56
SCGB2A1O75556 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCGB2A1O75556 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCGB2A1O75556 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCGB2A1O75556 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCGB2A1O75556 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCGB2A1O75556 AP003733.4-201ENST00000623785 1697 ntBASIC18.51■□□□□ 0.55
SCGB2A1O75556 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCGB2A1O75556 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCGB2A1O75556 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCGB2A1O75556 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.51■□□□□ 0.55
SCGB2A1O75556 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.51■□□□□ 0.55
SCGB2A1O75556 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCGB2A1O75556 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCGB2A1O75556 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
SCGB2A1O75556 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCGB2A1O75556 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCGB2A1O75556 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCGB2A1O75556 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.5■□□□□ 0.55
SCGB2A1O75556 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.5■□□□□ 0.55
SCGB2A1O75556 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCGB2A1O75556 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
SCGB2A1O75556 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCGB2A1O75556 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.49■□□□□ 0.55
SCGB2A1O75556 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SCGB2A1O75556 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.49■□□□□ 0.55
SCGB2A1O75556 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCGB2A1O75556 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCGB2A1O75556 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SCGB2A1O75556 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCGB2A1O75556 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCGB2A1O75556 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCGB2A1O75556 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCGB2A1O75556 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SCGB2A1O75556 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCGB2A1O75556 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCGB2A1O75556 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.48■□□□□ 0.55
SCGB2A1O75556 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCGB2A1O75556 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCGB2A1O75556 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCGB2A1O75556 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SCGB2A1O75556 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCGB2A1O75556 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.47■□□□□ 0.55
SCGB2A1O75556 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.47■□□□□ 0.55
SCGB2A1O75556 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCGB2A1O75556 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCGB2A1O75556 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SCGB2A1O75556 AC093536.1-201ENST00000569153 554 ntBASIC18.46■□□□□ 0.55
SCGB2A1O75556 AC007029.1-201ENST00000604183 313 ntBASIC18.46■□□□□ 0.55
SCGB2A1O75556 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCGB2A1O75556 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SCGB2A1O75556 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.46■□□□□ 0.55
SCGB2A1O75556 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
SCGB2A1O75556 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.46■□□□□ 0.54
SCGB2A1O75556 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.46■□□□□ 0.54
SCGB2A1O75556 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCGB2A1O75556 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.45■□□□□ 0.54
SCGB2A1O75556 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCGB2A1O75556 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCGB2A1O75556 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCGB2A1O75556 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCGB2A1O75556 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SCGB2A1O75556 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCGB2A1O75556 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SCGB2A1O75556 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SCGB2A1O75556 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.44■□□□□ 0.54
SCGB2A1O75556 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SCGB2A1O75556 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SCGB2A1O75556 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SCGB2A1O75556 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.44■□□□□ 0.54
SCGB2A1O75556 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCGB2A1O75556 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCGB2A1O75556 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.44■□□□□ 0.54
SCGB2A1O75556 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms