Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01546A6NGU7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LINC01546A6NGU7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LINC01546A6NGU7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01546A6NGU7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.8■□□□□ 0.28
LINC01546A6NGU7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.8■□□□□ 0.28
LINC01546A6NGU7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01546A6NGU7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.79■□□□□ 0.28
LINC01546A6NGU7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01546A6NGU7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC16.79■□□□□ 0.28
LINC01546A6NGU7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01546A6NGU7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.79■□□□□ 0.28
LINC01546A6NGU7 MIR6089-201ENST00000616698 64 ntBASIC16.79■□□□□ 0.28
LINC01546A6NGU7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.79■□□□□ 0.28
LINC01546A6NGU7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
LINC01546A6NGU7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01546A6NGU7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01546A6NGU7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LINC01546A6NGU7 EP400NL-214ENST00000641289 2402 ntBASIC16.78■□□□□ 0.28
LINC01546A6NGU7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01546A6NGU7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC01546A6NGU7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC16.78■□□□□ 0.28
LINC01546A6NGU7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01546A6NGU7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LINC01546A6NGU7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LINC01546A6NGU7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01546A6NGU7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01546A6NGU7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LINC01546A6NGU7 AC137767.1-201ENST00000602918 1920 ntBASIC16.77■□□□□ 0.28
LINC01546A6NGU7 AC005559.1-201ENST00000589661 871 ntBASIC16.77■□□□□ 0.28
LINC01546A6NGU7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01546A6NGU7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.77■□□□□ 0.27
LINC01546A6NGU7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LINC01546A6NGU7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01546A6NGU7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LINC01546A6NGU7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LINC01546A6NGU7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.76■□□□□ 0.27
LINC01546A6NGU7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01546A6NGU7 AC127496.7-201ENST00000625110 1798 ntBASIC16.76■□□□□ 0.27
LINC01546A6NGU7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01546A6NGU7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01546A6NGU7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.75■□□□□ 0.27
LINC01546A6NGU7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.75■□□□□ 0.27
LINC01546A6NGU7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC01546A6NGU7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LINC01546A6NGU7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC01546A6NGU7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LINC01546A6NGU7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LINC01546A6NGU7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01546A6NGU7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01546A6NGU7 AC136428.2-201ENST00000563187 214 ntBASIC16.75■□□□□ 0.27
LINC01546A6NGU7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC01546A6NGU7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01546A6NGU7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01546A6NGU7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
LINC01546A6NGU7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LINC01546A6NGU7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LINC01546A6NGU7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.74■□□□□ 0.27
LINC01546A6NGU7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01546A6NGU7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01546A6NGU7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
LINC01546A6NGU7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.27
LINC01546A6NGU7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01546A6NGU7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC01546A6NGU7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LINC01546A6NGU7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LINC01546A6NGU7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01546A6NGU7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01546A6NGU7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LINC01546A6NGU7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01546A6NGU7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01546A6NGU7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC01546A6NGU7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
LINC01546A6NGU7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01546A6NGU7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC01546A6NGU7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LINC01546A6NGU7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
LINC01546A6NGU7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC01546A6NGU7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.72■□□□□ 0.27
LINC01546A6NGU7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01546A6NGU7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01546A6NGU7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01546A6NGU7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01546A6NGU7 LINC00526-201ENST00000581067 1875 ntBASIC16.72■□□□□ 0.27
LINC01546A6NGU7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01546A6NGU7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01546A6NGU7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC01546A6NGU7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC01546A6NGU7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01546A6NGU7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01546A6NGU7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01546A6NGU7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01546A6NGU7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01546A6NGU7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC01546A6NGU7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01546A6NGU7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01546A6NGU7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01546A6NGU7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
LINC01546A6NGU7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC01546A6NGU7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms