Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 AC008761.3-201ENST00000624803 892 ntBASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB1Q9Y5F3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 LINC01225-203ENST00000563550 1244 ntBASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 AC073439.1-201ENST00000624121 1774 ntBASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHB1Q9Y5F3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 MIR648-201ENST00000385046 94 ntBASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 PRYP6-201ENST00000514804 343 ntBASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHB1Q9Y5F3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms