Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.65■□□□□ 0.58
USP25Q9UHP3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP25Q9UHP3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP25Q9UHP3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP25Q9UHP3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP25Q9UHP3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP25Q9UHP3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP25Q9UHP3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.65■□□□□ 0.58
USP25Q9UHP3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.65■□□□□ 0.58
USP25Q9UHP3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.65■□□□□ 0.58
USP25Q9UHP3 FAAHP1-202ENST00000446499 1238 ntBASIC18.65■□□□□ 0.58
USP25Q9UHP3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.65■□□□□ 0.58
USP25Q9UHP3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP25Q9UHP3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP25Q9UHP3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.65■□□□□ 0.58
USP25Q9UHP3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.65■□□□□ 0.58
USP25Q9UHP3 MIR3909-201ENST00000579518 119 ntBASIC18.65■□□□□ 0.58
USP25Q9UHP3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.65■□□□□ 0.58
USP25Q9UHP3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.65■□□□□ 0.58
USP25Q9UHP3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP25Q9UHP3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.65■□□□□ 0.58
USP25Q9UHP3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP25Q9UHP3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP25Q9UHP3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.65■□□□□ 0.58
USP25Q9UHP3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP25Q9UHP3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP25Q9UHP3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP25Q9UHP3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP25Q9UHP3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USP25Q9UHP3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP25Q9UHP3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.65■□□□□ 0.58
USP25Q9UHP3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP25Q9UHP3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP25Q9UHP3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
USP25Q9UHP3 AL009178.2-201ENST00000597278 2719 ntBASIC18.65■□□□□ 0.58
USP25Q9UHP3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.65■□□□□ 0.58
USP25Q9UHP3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
USP25Q9UHP3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP25Q9UHP3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP25Q9UHP3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP25Q9UHP3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.64■□□□□ 0.57
USP25Q9UHP3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP25Q9UHP3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP25Q9UHP3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP25Q9UHP3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP25Q9UHP3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP25Q9UHP3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP25Q9UHP3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP25Q9UHP3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP25Q9UHP3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
USP25Q9UHP3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP25Q9UHP3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP25Q9UHP3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.63■□□□□ 0.57
USP25Q9UHP3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
USP25Q9UHP3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP25Q9UHP3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.63■□□□□ 0.57
USP25Q9UHP3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
USP25Q9UHP3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
USP25Q9UHP3 AC004870.1-201ENST00000315132 882 ntBASIC18.63■□□□□ 0.57
USP25Q9UHP3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.63■□□□□ 0.57
USP25Q9UHP3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP25Q9UHP3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.63■□□□□ 0.57
USP25Q9UHP3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP25Q9UHP3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.63■□□□□ 0.57
USP25Q9UHP3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.63■□□□□ 0.57
USP25Q9UHP3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.63■□□□□ 0.57
USP25Q9UHP3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
USP25Q9UHP3 AC021097.1-201ENST00000607902 574 ntBASIC18.63■□□□□ 0.57
USP25Q9UHP3 AL691432.3-201ENST00000621860 400 ntBASIC18.63■□□□□ 0.57
USP25Q9UHP3 AC148477.8-201ENST00000624298 468 ntBASIC18.63■□□□□ 0.57
USP25Q9UHP3 AC117500.6-201ENST00000624871 588 ntBASIC18.63■□□□□ 0.57
USP25Q9UHP3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.63■□□□□ 0.57
USP25Q9UHP3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP25Q9UHP3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP25Q9UHP3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP25Q9UHP3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP25Q9UHP3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.63■□□□□ 0.57
USP25Q9UHP3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP25Q9UHP3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP25Q9UHP3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP25Q9UHP3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms