Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRFN1Q9P244 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRFN1Q9P244 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LRFN1Q9P244 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRFN1Q9P244 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRFN1Q9P244 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.89□□□□□ -0.03
LRFN1Q9P244 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.89□□□□□ -0.03
LRFN1Q9P244 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRFN1Q9P244 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.89□□□□□ -0.03
LRFN1Q9P244 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRFN1Q9P244 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LRFN1Q9P244 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRFN1Q9P244 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRFN1Q9P244 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRFN1Q9P244 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRFN1Q9P244 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LRFN1Q9P244 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRFN1Q9P244 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LRFN1Q9P244 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRFN1Q9P244 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.89□□□□□ -0.03
LRFN1Q9P244 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRFN1Q9P244 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRFN1Q9P244 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRFN1Q9P244 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRFN1Q9P244 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRFN1Q9P244 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRFN1Q9P244 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRFN1Q9P244 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRFN1Q9P244 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRFN1Q9P244 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.88□□□□□ -0.03
LRFN1Q9P244 AL080243.2-201ENST00000418783 582 ntBASIC14.88□□□□□ -0.03
LRFN1Q9P244 AC009477.1-201ENST00000452936 217 ntBASIC14.88□□□□□ -0.03
LRFN1Q9P244 AL139010.1-201ENST00000454878 894 ntBASIC14.88□□□□□ -0.03
LRFN1Q9P244 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 AC004233.3-201ENST00000607794 1269 ntBASIC14.88□□□□□ -0.03
LRFN1Q9P244 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRFN1Q9P244 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRFN1Q9P244 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.88□□□□□ -0.03
LRFN1Q9P244 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRFN1Q9P244 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRFN1Q9P244 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRFN1Q9P244 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRFN1Q9P244 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.87□□□□□ -0.03
LRFN1Q9P244 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LRFN1Q9P244 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
LRFN1Q9P244 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
LRFN1Q9P244 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.87□□□□□ -0.03
LRFN1Q9P244 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 SERBP1P3-201ENST00000459980 809 ntBASIC14.87□□□□□ -0.03
LRFN1Q9P244 POU5F1P6-201ENST00000466990 990 ntBASIC14.87□□□□□ -0.03
LRFN1Q9P244 RN7SL618P-201ENST00000477850 296 ntBASIC14.87□□□□□ -0.03
LRFN1Q9P244 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.87□□□□□ -0.03
LRFN1Q9P244 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.87□□□□□ -0.03
LRFN1Q9P244 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 AL844908.2-201ENST00000609461 460 ntBASIC14.87□□□□□ -0.03
LRFN1Q9P244 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.87□□□□□ -0.03
LRFN1Q9P244 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
LRFN1Q9P244 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.87□□□□□ -0.03
LRFN1Q9P244 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.87□□□□□ -0.03
LRFN1Q9P244 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.87□□□□□ -0.03
LRFN1Q9P244 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.87□□□□□ -0.03
LRFN1Q9P244 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.87□□□□□ -0.03
LRFN1Q9P244 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LRFN1Q9P244 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRFN1Q9P244 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms