Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL20A1Q9P218 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.19■□□□□ 0.5
COL20A1Q9P218 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.19■□□□□ 0.5
COL20A1Q9P218 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.19■□□□□ 0.5
COL20A1Q9P218 RPL13P2-201ENST00000440687 659 ntBASIC18.19■□□□□ 0.5
COL20A1Q9P218 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.19■□□□□ 0.5
COL20A1Q9P218 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.19■□□□□ 0.5
COL20A1Q9P218 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
COL20A1Q9P218 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL20A1Q9P218 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.19■□□□□ 0.5
COL20A1Q9P218 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.19■□□□□ 0.5
COL20A1Q9P218 AL391069.4-201ENST00000609583 481 ntBASIC18.19■□□□□ 0.5
COL20A1Q9P218 MIR8072-201ENST00000614241 80 ntBASIC18.19■□□□□ 0.5
COL20A1Q9P218 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
COL20A1Q9P218 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL20A1Q9P218 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
COL20A1Q9P218 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL20A1Q9P218 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL20A1Q9P218 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL20A1Q9P218 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL20A1Q9P218 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.19■□□□□ 0.5
COL20A1Q9P218 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.19■□□□□ 0.5
COL20A1Q9P218 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 AC087499.6-201ENST00000411576 835 ntBASIC18.18■□□□□ 0.5
COL20A1Q9P218 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 CTBP2P3-201ENST00000585629 1255 ntBASIC18.18■□□□□ 0.5
COL20A1Q9P218 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.18■□□□□ 0.5
COL20A1Q9P218 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL20A1Q9P218 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.17■□□□□ 0.5
COL20A1Q9P218 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.17■□□□□ 0.5
COL20A1Q9P218 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL20A1Q9P218 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL20A1Q9P218 CU639417.3-201ENST00000624240 1404 ntBASIC18.17■□□□□ 0.5
COL20A1Q9P218 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL20A1Q9P218 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.17■□□□□ 0.5
COL20A1Q9P218 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.17■□□□□ 0.5
COL20A1Q9P218 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
COL20A1Q9P218 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL20A1Q9P218 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
COL20A1Q9P218 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.17■□□□□ 0.5
COL20A1Q9P218 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.17■□□□□ 0.5
COL20A1Q9P218 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL20A1Q9P218 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
COL20A1Q9P218 KRT18P64-201ENST00000434946 1219 ntBASIC18.17■□□□□ 0.5
COL20A1Q9P218 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.17■□□□□ 0.5
COL20A1Q9P218 ELK1P1-201ENST00000485699 580 ntBASIC18.17■□□□□ 0.5
COL20A1Q9P218 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.17■□□□□ 0.5
COL20A1Q9P218 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL20A1Q9P218 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.17■□□□□ 0.5
COL20A1Q9P218 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.17■□□□□ 0.5
COL20A1Q9P218 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.17■□□□□ 0.5
COL20A1Q9P218 AC099568.2-201ENST00000609194 695 ntBASIC18.17■□□□□ 0.5
COL20A1Q9P218 IGHV3-72-202ENST00000621503 303 ntBASIC18.17■□□□□ 0.5
COL20A1Q9P218 AP001282.1-201ENST00000531301 1499 ntBASIC18.17■□□□□ 0.5
COL20A1Q9P218 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
COL20A1Q9P218 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.17■□□□□ 0.5
COL20A1Q9P218 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL20A1Q9P218 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL20A1Q9P218 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL20A1Q9P218 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms