Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 HLA-J-203ENST00000494367 1087 ntBASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 AC109322.1-201ENST00000524499 1264 ntBASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 AC243562.2-201ENST00000561247 970 ntBASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 SNHG9-202ENST00000564014 471 ntBASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 AC139530.3-201ENST00000620344 690 ntBASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 AL139010.1-201ENST00000454878 894 ntBASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 AL512356.2-201ENST00000546955 174 ntBASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 AP001160.2-201ENST00000596071 487 ntBASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 AC018892.3-201ENST00000623986 2499 ntBASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.47
BLOC1S4Q9NUP1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 AC004987.2-201ENST00000395959 1148 ntBASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 EEF1DP4-201ENST00000446006 880 ntBASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 AC105021.1-202ENST00000570572 669 ntBASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 AL133215.2-201ENST00000609242 977 ntBASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BLOC1S4Q9NUP1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BLOC1S4Q9NUP1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms