Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 MST1L-201ENST00000442552 2185 ntBASIC15.17■□□□□ 0.02
CTPS2Q9NRF8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 RHOQP3-201ENST00000437982 621 ntBASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 KRT18P2-201ENST00000447938 1258 ntBASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 AC018845.2-201ENST00000568326 409 ntBASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 AL161772.1-201ENST00000610494 4412 ntBASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 AC144831.1-201ENST00000573312 2656 ntBASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTPS2Q9NRF8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 AC005622.1-201ENST00000636801 1703 ntBASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 HMGA1P7-201ENST00000406908 502 ntBASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 AC103702.1-201ENST00000548801 2630 ntBASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 AC068418.2-201ENST00000577309 3703 ntBASIC15.15■□□□□ 0.02
CTPS2Q9NRF8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.14■□□□□ 0.01
CTPS2Q9NRF8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms