Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KCNMB3Q9NPA1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 PCDHA1-201ENST00000378133 2726 ntBASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 AL355385.1-201ENST00000606123 409 ntBASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 AL844908.2-201ENST00000609461 460 ntBASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 AC138932.1-201ENST00000534164 6830 ntBASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 AC010491.1-201ENST00000563101 2797 ntBASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 REXO1L1P-202ENST00000608646 1974 ntBASIC18.1■□□□□ 0.49
KCNMB3Q9NPA1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 AC087499.5-201ENST00000452760 1342 ntBASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 FO393414.2-201ENST00000405153 598 ntBASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 AC241585.1-201ENST00000433527 519 ntBASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 AL512361.1-201ENST00000554200 418 ntBASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 AL390754.1-201ENST00000619088 582 ntBASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNMB3Q9NPA1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KCNMB3Q9NPA1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
KCNMB3Q9NPA1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.08■□□□□ 0.49
KCNMB3Q9NPA1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.08■□□□□ 0.49
KCNMB3Q9NPA1 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KCNMB3Q9NPA1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KCNMB3Q9NPA1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KCNMB3Q9NPA1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KCNMB3Q9NPA1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
KCNMB3Q9NPA1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms